Detail



ID : Ahg490093

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490093|fgenesh2_kg.6__3227__AT4G04460.1
Sequence
ATTCTTCTTC GTCTTGTTAA GCTTATAAGA ATCTCTACTC ACATTTTCTC TGTAAAAATG GGAACTAGGT TCCAATCATT CTTGCTCGTG TTCTTGCTTT CATGTTTAAT CCTCATATCC ACTGCCTTGT GTGAGCGGAA AGGTGATGGG ACGATTAGAA TTGGATTGAA GAAGAGGAAA CTAGACCGGA GCAACAGGCT AGCTTCTCAG CTTTTTTTGA AAAACCGAGG GTCTTGGTCT CCCAAAGACT ATTTTCGCCT GAACGATGCA AATGCGGATA TGGTTCCGCT GAAAAATTAT TTGGATGCTC AATACTATGG TGACATTACC ATTGGTACTC CACCTCAGAA GTTCACTGTG ATCTTTGATA CTGGTAGCTC CAATCTCTGG ATACCATCTA CTAAATGTTA CTTATCGGTT GCTTGTTATT TCCACTCCAA GTACAAGGCT AGCCAGTCAT CGTCATACAG AAAGAACGGG AAACCCGCGT CAATCCGCTA TGGGACAGGT GCTATTTCTG GTTACTTTAG CAATGATGAT GTTAAAGTTG GTGATATCGT TGTCAAGGAG CAGGAATTCA TAGAGGCTAC TACTGAGCCT GGTATAACCT TCTTGCTGGC AAAGTTTGAT GGTATCCTCG GTTTGGGTTT CAAAGAGATT TCTGTCGGAA ATTCAACTCC GGTTTGGTAT AACATGGTAG AAAAAGGTTT GGTTAAGGAC CCAGTCTTTT CGTTCTGGCT TAACCGTAAC CCGCAAGATC AAGAAGGTGG TGAGATTGTT TTTGGCGGAG TCGACCCAAA ACACTTCAAA GGAGAGCATA CTTATGTTCC TGTGACACAT AAAGGTTACT GGCAGTTTGA CATGGGTGAT GTCCAAATTG CTGGCAAACC TACAGGATAT TGTGCTAAAG GTTGTTCTGC TATTGCTGAT TCCGGAACTT CTCTGCTCAC CGGTCCATCG ACTGTCATCA CGATGATCAA TCATGCGATA GGAGCACAAG GAATCGTAAG CCGTGAATGC AAGGCTGTGG TGGATCAGTA CGGAAAAACA ATGTTGAATT CTCTTCTAGC TCAGGAGGAT CCGAAGAAGG TATGCTCACA AATTGGAGTC TGCGCTTATG ATGGTACACA CAGTGTGAGT ATGGACATCC AGTCAGTTGT AGATGATGAA ACATCGGGTC TTTTAAACCA AGCGATGTGC AGTGCTTGCG AAATGGCAGC CGTGTGGATG GAGAGCGAAT TGACTCAGAA TCAAACACAA GAACGCATAC TCGCTTATGC TGCTGAGCTA TGTAACCATA TACCAACTAA AAACCAACAA TCAGCAGTGG ACTGTGAGAG GGTTTCGTCG ATGCCTATAG TCTCATTCTC AATTGGCGGC AGAACCTTTG ATCTCTCTCC TCAAGATTAT ATATTCAAGA TTGGGGACGG AGTTGAGTCT CAGTGCACTA GCGGTTTCAC GGCAATGGAT ATTCCTCCGC CTCGTGGACC TCTCTGGATC TTGGGTGATA TCTTCATGGG ACCATATCAC ACTGTGTTCG ATTACGGGAA AGCAAGAGTT GGATTCGCCA AAGCTGCTTA AACAAGACCT CTTCTTTAAG ACCCTTTTTT ATATAATGTT TGTGAATGTG TTTGTAATAA CTTAAACATA TTGCTATTCT AGAATGGTAT CATCTTAATA CAGATTTTTA TTTGGTTTCA GAGCT 
Length1705
Protein Sequence
Protein Residue
Map Locationscaffold_6: 21070387.. 21073671
Download Sequence
A.thaliana
AGI-codeAT4G04460.1
DescriptionSaposin-like aspartyl protease family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.583 Ahg494381 RAC-like 2
19.8997 Ahg475202
21.2132 Ahg491113 xylem cysteine peptidase 1
27.5681 Ahg896320 QUASIMODO2 LIKE 2
27.6043 Ahg495255 Peroxidase superfamily protein
31.1609 Ahg485694 Pectin lyase-like superfamily protein
35.7071 Ahg496399 ERECTA-like 1
36.2215 Ahg492954 chromomethylase 2
43.3705 Ahg937476 Plant invertase/pectin methylesterase inhibitor superfamily
46.3141 Ahg482815 Laccase/Diphenol oxidase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression