Detail


ID : Ahg495255

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495255|fgenesh2_kg.8__1071__AT5G51890.1
Sequence
CATCAAATCC TCAAACAACT TCAAGACCAA AAGAGTGCTT TTCGAGGCCC AAAACAAAAA CAAAAAACCA TAAAATGGCA TTCTCGAAAG TACTCATTTT CGCGATGACC ATTGTGGTTT TGGCGATAGT TAGGCCCTCA GAAGCTGCTC TTGATGCTCA TTACTATGAT CGATCGTGCC CCGCTGCTGA AAAAATCATA CTTGAAACTG TTAGGAATGC TACTTTGTAT GATCCCAAAG TGCCTGCTCG TCTCCTCAGA ATGTTCTTCC ACGATTGCTT CATCAGGGGA TGTGATGCGT CCATTCTACT TGATTCGGCA CGGTCAAACC AAGCTGAGAA GGATGGTCCT CCTAACATCT CGGTACGGTC ATTTTACGTG ATCGAAGATG CTAAGAGAAA GCTCGAAAAG GCTTGTCCTC GTACCGTGTC TTGTGCCGAT GTAATCGCCA TCGCAGCCAG AGATGTGGTC ACCCTGTCCG GTGGTCCTTA TTGGAGCGTA TTGAAAGGGC GAAAAGATGG GACAATTTCG CGAGCCAACG AGACTAGAAA TCTCCCAGCA CCAACGTTCA ATGTTTCTCA ACTGATCCAA AGCTTTGCAG CAAGAGGATT GTCGGTGAAA GACATGGTTA CACTCTCAGG TGGCCACACC ATAGGGTTCT CTCACTGTTC TTCTTTCGAG TCCCGTCTTC AAAACTTCAG CAAAATCCAT GACATTGATC CTTCGATGAA CTATGCGTTT GCACAAACCC TGAAAAGGAA ATGTCCGAGA TCGTCTAACC GAGGCAAGAA CGCAGGGACA GTCTTGGACT CTACGTCCTC GGTTTTCGAC AATGTTTACT ACAAGCAGAT TTTGTCCGGG AAAGGAGTGT TTGGGTCTGA TCAGGCCCTT CTAGGCGATT CTCGGACTAA GTGGATCGTT GAGACGTTTG CTCGAGACCA AAAAGCTTTC TTCAAAGAGT TTGCAGCTTC CATGGTAAAA CTTGGAAACT TTGGAGTCAA GGAGACCGGA CAAGTGAGAG TTAACACTCG CTTCGTCAAC TAAAAGCATA ACCCTAACAA GCAACCAAAT GAGAGTTTTC TTTTCTTCAA ATTTGATTTC ATTTATACTT GATATATTAT AATAATGTAG ACCGGCCAAT TTATGGATCG GTTATTAAAC CTTCTAATTC TCTATGAGTT GCAGAGTATG CTTTAAAAGT AAATTTGTTC TGCTTC
Length1216
Protein Sequence
Protein Residue
Map Locationscaffold_8: 13928553.. 13929957
Download Sequence
A.thaliana
AGI-codeAT5G51890.1
DescriptionPeroxidase superfamily protein
TAIR curator summaryencodes peroxidase involved in the lignification of tracheary elements (TE) in roots
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg472321 xylem cysteine peptidase 2
9.59166 Ahg490817 elicitor-activated gene 3-1
9.74679 Ahg486710 germin-like protein 10
10.3923 Ahg931814
12.083 Ahg318457 chitinase-like protein 2
15 Ahg951932 gamma-glutamyl hydrolase 2
15.8745 Ahg477135 Leucine-rich repeat protein kinase family protein
18.8149 Ahg355235 hydroperoxide lyase 1
19.2614 Ahg477521 zinc finger (C2H2 type) family protein
20.9762 Ahg907175 Glycosyl hydrolases family 32 protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression