| Annotation |
|---|
| Description | jgi|Araly1|490122|fgenesh2_kg.6__3256__AT4G04885.1 |
| Sequence |
GAGTTTCCAT GGTGGAACAA AACCCTAGCC TTATGCTGAC ACTAATTATC ACTCTTCACT ATTGAATTGG TGATGGGCTC AGAGAAAATC CTCAATCCAA GGCTTCTTTC GATCAATAGC AGCACCAGTA GCCGCAAAGG TATGTCCGTT GAGTTGCCGC AGAAACCGCC GCCACCGCCG TCGTTGCTAG ACCGGTTCAA AGCTTTGCTT AATCAGCGTG AAGATGAGTT CGGTGGTAGT GAAGAGATTT TGCCTCCGAG TATGGATGAG ATTGTTCAGC TTTATGAGGT TGTTTTGGGA GAGCTTACTT TCAATTCTAA GCCTATTATC ACTGATCTCA CTATTATCGC TGGTGAACAA CGGGAACATG GTGAAGGAAT CGCTAATGCT ATTTGCACTC GAATTCTTGA GGCTCCAGTT GAGCAAAAGT TGCCTTCTCT GTATCTTTTA GACAGCATCG TTAAGAATAT TGGGCGGGAT TATGTTCGTT ATTTCTCATC CCGTCTACCC GAGGTCTTCT GCCTAGCATA CAGGCAAGCG CATCCGAGTT TACATCCGTC AATGCGCCAC TTGTTTGGGA CTTGGTCAAG TGTTTTTCCA CCACCTGTAC TACGCAAGAT TGAGATGCAA TTGCAACTTT CATCTGCAGC ACACCAATCT TCCTTGGGGG CTTCCGAGCC TAGTCAACCA ACGAGGGGCA TACATGTTAA TCCAAAATAC CTTCGCAGGC TGGAGCCTTC AGCCGCCGAA AATAATCTAA GAGGAATTAA TTCCAGTGCA AGAGTGTATG GCCAAAATTC CGGTGGGTAT GATGATTTTG AAGATCGTTT AGAGAGCCCA TCTTCACTAT CTAGTACAGC AGAGGGTTTT CCCAGGAGGT TTAATGATGG AGTTAATCCT TCTAATCAAG CCTTTAACTA TGGAATGGGT CGAGCTACTA GCAGAGATGA TGAACATATG GAATGGCGAA GAAAGGAAAA CTTAGGCCAA GGAAATGATC ACGATAGACC CAGAGCGTTG ATAGATGCAT ATGGAGTTGA CACCAGCAAA CACGTAACAA TCAATAAACC AATTCGCGAT ATGAATGGCA TACACAGTAA GATGGTTACA CCGTGGCAGA ACACTGAGGA AGAAGAGTTT GATTGGGAAG ATATGAGCCC TACCCTAGAT CGTAGCAGAG CTGGTGAATT TTTGCGATCA TCTGTCCCAG CATTAGGAAG TGTAAGGGCA AGACCCAGAG TAGGAAACAC AAGTGATTTT CATTTAGATT CTGACATTAA GAATGGTGTA AGTCATCAGC TACGAGAAAG TTGGAATTTG TCACAAAATT TTCCACATTC ATCCAGCCAC GTTAATACCA GAGCAGGAAA GGACTTGAAA GTATTGGCTT CATCTGTAGG ACTAGTTTCA TCAAACAGTG ATTTCGGGGC TCCTCCATTT GATAGCATTC AAGATGTTAA CTCACGTTTT GGTCGGGCTC TTCCTGATGG AACATGGTCC CATTTGAATG TTAGAGGACC CAACTCTCTC CCTGTACCTT CTGCTCACTT GCATCATTTG GCAAATCCTG GTAATGCGAT ATCAAATCGC TTGCATGGTA AGCCGTTATA TAGGCCCGAA AACCAGGTCT CTCAGAGTCA TCATAATGAT ATGACTCAAC AGAATCAGAT GCTAGTTAAT TATTTGCCAT CTTCATCTGC TATGGCTCCA AGGCCAATGC AATCGCTGTT AAACCATGTA AGTCATGGGT ACCCTCCACA TGGGTCAACC ATTAGACCAT CTTTATCAAT CCAAGGTGGG GAAGCCATGC ATCCTCTTTC TTCAGGGGTT TTATCTCAGA TAGGATCCTC TAATCAACCA CCGGGTGGCG CATTCTCTGG TCTGATTGGC TCTCTCATGG CTCAAGGTTT GATCTCGTTG AACAATCAGC CTGCTGGCCA GGGACCATTG GGGTTGGAGT TTGATGCGGA CATGCTCAAG ATACGTAATG AGTCTGCAAT CAGTGCTCTA TATGGGGATC TCCCGAGGCA ATGCACAACA TGTGGTCTAC GCTTCAAGTG CCAAGAAGAG CACAGTAAGC ACATGGATTG GCATGTAACC AAGAACAGGA TGTCCAAGAA CCATAAGCAG AACCCTTCTC GGAAATGGTT TGTAAGTGCT AGCATGTGGC TTAGTGGTGC AGAAGCACTT GGAGCTGAAG CAGTTCCAGG GTTCTTACCC GCAGAGCCAA CAACAGAAAA GAAGGATGAC GAAGAGATGG CAGTTCCTGC AGATGAAGAC CAAACTTCAT GCGCGTTATG TGGTGAGCCA TTTGAAGACT TTTATAGTGA TGAAACCGAG GAATGGATGT ACAAAGGTGC GGTGTACATG AATGCTCCTG ACGAATCAAC AACAGATATG GACAAGTCTC AGTTAGGTCC TATAGTGCAT GCAAAGTGCA GGCCAGAGTC CAATGGGGGT GATATGGAAG AGGGTAGTCA GAGAAAAAAG ATGCGGAGTT AGATCCCTTA GACCGAATTT TAGGTCTTTT TCTTGACTAC ATTTAAGTTA CATTCTTATT TCTTCATCAT CTATATGCAC TTAGTCACAA AATACCATTG ATGGAGAGAA ATGATGGAGA GAGTCTTCTT TCTCCTTTGT ACCATTGAAA AAAAAGAGAG GTTTACACCC ACATATCTTA TCATTCTTTA TGCCTCTAAA ATCCGGTTGT GCCTTAGGAC ATGGATAACG TGTAACTGTT CTGCATTCTC TGCTACACCT AACCTGGGGT GCTTGTAGTA GTAAAATCAG ATGTCAGATG TAGCAGTTTC CCCATGTATA TGGAATACAA TGTGTCTGTT TCGGATTGTC TTTTTCTTTT TCATCTTTAG ATATTGCAGG GAAAGCCCGG GGAGACTGAT ATGCGAGTGT GAACAGATTT CTTATGATGA ATGGATCTCA TAGATGCTGT TGCTAAGAGA ACCAGTTTTC AGGTTTTTCT TTAGAGCTTT CCCTGTTTGA GTTTTACTTT TTTATGTTAG GCTGTTAGCT AAGAATGTTA GTTAACATAA CTCTTTTTAA GCGTAT |
| Length | 3066 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 21240789.. 21243210 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G04885.1 |
| Description | PCF11P-similar protein 4 |
| TAIR curator summary | Encodes PCFS4 (Pcf11p-similar protein 4), a homolog of yeast polyadenylation factor Protein 1 of Cleavage Factor (Pcf11p). Regulates FCA (AT4G16280) mRNA polyadenylation. Promotes flowering time. |
| Alias | [PCFS4][PCF11P-similar protein 4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.245 |
Ahg478015 | Pseudouridine synthase family protein |
| 11.6619 |
Ahg495825 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| 12.3693 |
Ahg470937 | ARF GAP-like zinc finger-containing protein ZIGA4 |
| 14.6969 |
Ahg472140 | Pectin lyase-like superfamily protein |
| 15.6205 |
Ahg929992 | polymerase gamma 1 |
| 15.8745 |
Ahg484430 | Transducin/WD40 repeat-like superfamily protein |
| 16.4317 |
Ahg474021 | Plant protein of unknown function (DUF639) |
| 23.3452 |
Ahg324617 | embryo defective 1703 |
| 25.923 |
Ahg488375 | RNA-binding KH domain-containing protein |
| 32.665 |
Ahg493706 | ZPR1 zinc-finger domain protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|