Detail



ID : Ahg490180

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490180|fgenesh2_kg.6__3314__AT4G05330.1
Sequence
GCCATTTTTC TTGAAAATTC ATCTCTTTCC TTTGTCTATC TATCCTCCCT TCCCCAACAT TGATTTTGTT TGATGATTGT TGGGTTTTGA AAGAAGAGCA ATGAGCAATT ATGCAGCCGG ACTCGGTAAG CCTGGCTCAG GTAAAAGGAG AATCAGAGAT CTTTTAAATC AACCTGATAA CCGAGTCTGC GCTGATTGTG GCGCTTCTGA TCCTAAATGG GCATCAGCAA ATATCGGGGT ATTCATTTGC TTAAAATGTT GCGGTGTGCA CAGAAGCCTC GGCACTCATA TCTCAAAGGT TTTGTCTGTG ACACTTGATG AATGGTCAGA TGAGGAAGTC GATTCCATGA TTGAAATTGG AGGAAATGCG TCTGCTAATT CAATTTACGA AGCTTTTGTA CCTGACACAT GCTCTAAGCC TGGACCTGAT GTTAGTCATG ACCAGCGTAT GAGATTCATT AGGGCAAAAT ATGAACTGCA AGAGTTTCTG AAGCCAAGCT TGCGGATTAC ATCCGGGAAA TGCTCAACAA AGAGTTCAGC TTTTCTTACA TCAAGTCTTT CTAGAAAGAT CATGGATAGT TTTCGCACAA ATTCATCATC ACAGAAGATA TTTCAGGAAG GAATGGTAGA GTTTATTGGA TTGTTGAAGG TGACTATTAA GAAAGGTACT AACTTAGCAA TCAGAGACAT GATGTCAAGT GATCCATATG TTGTGTTGAA TCTAGGGAAG CAAAAACTTC AGACAACTGT TGTGAATAGT AATTTGAACC CGGTATGGAA TCAAGAACTC ATGCTGTCTG TTCCTGAGAG CTATGGCCCT GTGAAATTGC AAGTGTATGA TTATGATACA TTTTCTGCTG ATGACATAAT GGGGGAAGCA GAGATTGATA TCCAACCTTT GATAACATCT GCAATGGCTT TTGGGGATCC AGAAATGTTT GGGGATATGC AGATTGGGAA ATGGCTAAAA TCGCATGATA ATCCACTAAT AGATGACAGT ATCATTAACA TTGTTGATGG GAAAGTGAAA CAGGAGGTTC AGATCAAGCT TCAGAATGTA GAGTCTGGAG AATTAGAGCT AGAAATGGAA TGGCTACCAC TTGACCAATA AGTGTCAAAT AGGGTCTCAT AACCTCTATA AATTCTTTGC TTTTTTTTTT TTGGAAATTT TCACAACTCT TTTTTGCATT TTTATCCTCA TCCCAGAGGA AAATGTATGT TGATGTTTGT ATAACCCAAT GGATTACTAT GATGTTTTTG ATTGATGGAA AAAGG 
Length1275
Protein Sequence
Protein Residue
Map Locationscaffold_6: 21521365.. 21523953
Download Sequence
A.thaliana
AGI-codeAT4G05330.1
DescriptionARF-GAP domain 13
TAIR curator summaryA member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.
Alias[AGD13][ARF-GAP domain 13]
Gene coexpression
MR
MR Locus Description
9.32738 Ahg475711 Translation initiation factor eIF3 subunit
20.6882 Ahg487414 ARM repeat superfamily protein
31.5278 Ahg482617 Family of unknown function (DUF662)
38.5746 Ahg947354 Endomembrane protein 70 protein family
49.4975 Ahg944731 ascorbate peroxidase 6
50.1996 Ahg941040 biotin carboxyl carrier protein 2
54.909 Ahg920383 DYNAMIN-like 1C
63.0476 Ahg485497 Phosphoinositide phosphatase family protein
70.3136 Ahg481823 RHOMBOID-like 1
71.5542 Ahg475589 Cystathionine beta-synthase (CBS) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression