Detail



ID : Ahg920383

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|920383|scaffold_101664.1
Sequence
TGTGATACTT TCCAGGAAAC ATGGCGACGA TGAAAAGTTT GATAGGTCTG ATTAACAAAA TCCAGAGGGC TTGTACTGTC CTCGGAGATC ATGGCGGTGA AGGAATGTCG CTTTGGGAAG CTCTACCAAC CGTCGCTGTT GTTGGTGGCC AGAGTTCCGG AAAATCTTCA GTTCTAGAAA GTGTTGTGGG AAGAGATTTT CTGCCTCGTG GATCTGGTAT CGTTACTAGG AGGCCATTGG TGTTGCAGCT TCATAAGACT GAAGAAGGGA CAACTGAGTA CGCTGAGTTT CTTCATGCTC CTAAGAAGAG ATTTGCTGAT TTTGCTGCTG TGCGGAAGGA AATTGAGGAT GAAACTGATC GTATTACTGG GAAGTCTAAA CAAATCTCAA ACATTCCAAT TCAGCTGAGC ATATATTCTC CTAATGTTGT TAATCTGACG CTCATAGATC TTCCGGGTTT GACGAAGGTT GCTGTAGAGG GACAACCGGA TAGTATTGTC CAAGACATTG AAAATATGGT CCGCTCTTAT GTTGAAAAGC CAAATTGCAT CATATTGGCT ATTTCTCCAG CAAATCAAGA TATTGCTACC TCGGACGCTA TAAAACTTGC TAGAGAAGTT GATCCTACAG GCGAAAGGAC TTTTGGAGTT GCAACCAAGC TTGATATCAT GGATAAAGGA ACAGATTGTC TAGACGTTCT TGAGGGAAGG TCGTACCGTT TGCAACATCC CTGGGTTGGA ATTGTGAATC GTTCACAAGC TGATATTAAT AAGAGGGTCG ATATGATTGC TGCACGTAGA AAAGAGCGAG AATATTTTGA AACAAGCCCT GAATACGGGC ACTTAGCTAG TAGAATGGGA TCAGAATATC TAGCAAAACT CTTGTCTCAG CACTTAGAGA CTGTTATCAG GCAGAAAATA CCCAGTATTG TTGCTTTGAT CAACAAAAGC ATCGATGAGA TAAATGCAGA GCTGGATAGG ATTGGGAGAC CCATTGCAGT AGATTCAGGA GCCCAACTCT ACACAATTTT GGAACTCTGC CGGGCATTTG ATCGTGTCTT TAAGGAGCAC TTGGATGGAG GACGACCTGG TGGAGACCGG ATTTATGGAG TTTTTGACCA TCAATTACCA GCAGCCTTAA AGAAACTTCC CTTTGATCGA CATCTCTCTA CCAAAAATGT TCAGAAGGTT GTTTCAGAAG CTGATGGTTA TCAGCCGCAT CTTATTGCTC CTGAACAAGG ATACAGAAGG CTCATTGATG GATCCATAAG CTATTTCAAA GGACCAGCTG AAGCCACTGT CGATGCAGTG CATTTCGTAT TGAAGGAGCT GGTCAGAAAG TCCATTTCAG AAACAGAGGA ACTGAAGCGA TTCCCTACTC TAGCAAGCGA TATAGCAGCT GCTGCAAATG AAGCTCTCGA AAGATTCAGA GATGAAAGCA GGAAAACGGT TCTACGTCTG GTGGATATGG AATCCAGCTA CCTCACGGTT GAGTTCTTCA GGAAACTGCA TCTTGAACCC GAGAAAGAGA AACCAAACCC AAGGAATGCC CCAGCACCAA ACGCAGACCC CTACTCCGAT AATCACTTCA GAAAGATTGG ATCCAACGTG AGTGCATACA TAAACATGGT CTGCGACACA TTGAGAAACT CACTTCCCAA AGCTGTCGTT TACTGCCAAG TTAGAGAAGC TAAGAGATCG CTTCTCAACT TCTTCTACGC TCAAGTTGGC AGGAAAGAGA AGGAGAAGCT GGGTGCGATG TTGGACGAAG ACCCACAGCT GATGGAACGA AGAGGAACCT TAGCTAAACG GCTCGAGCTT TACAAACAAG CTAGAGATGA CATCGATGCT GTGGCTTGGA AGTAAGGATT TGCTAAGAAA TATTC 
Length1885
Protein Sequence
Protein Residue
Map Locationscaffold_1: 5979060.. 5982703
Download Sequence
A.thaliana
AGI-codeAT1G14830.1
DescriptionDYNAMIN-like 1C
TAIR curator summaryEncodes a dynamin-like protein that is involved in mitochondrial morphogenesis and pollen development. Protein is localized as speckles in the cytoplasm, partially co-localizes with mitochondrial markers, cell plate of dividing cells, and the tip of root hairs, root cap cells, and expanding part of trichoblasts.
Alias[ADL1C][ADL5][DL1C][DRP1C][DYNAMIN-like 1C][ARABIDOPSIS DYNAMIN-LIKE PROTEIN 5][DYNAMIN RELATED PROTEIN 1C]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg891118 Endomembrane protein 70 protein family
3.87298 Ahg490436
5.2915 Ahg940921 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
6 Ahg488478 Tetratricopeptide repeat (TPR)-like superfamily protein
9.21954 Ahg481441 syntaxin of plants 32
9.38083 Ahg492127 hydroxyproline-rich glycoprotein family protein
11.3137 Ahg478454 Clathrin, heavy chain
14.6969 Ahg492396 RAB geranylgeranyl transferase alpha subunit 1
19.4165 Ahg478929 Lactate/malate dehydrogenase family protein
22.7596 Ahg493493 Sec23/Sec24 protein transport family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression