Detail



ID : Ahg490262

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490262|fgenesh2_kg.6__3396__AT4G03000.1
Sequence
CTTCATCTTC TAGCCACGCA CTTGTTCTCT TTATCACAGT GCCCCTCTCT GTAACACTCT TTATTTATTA ATATATATTC ATCGATCCCT CTCTCTCTCT CTTCGATTCT CTTCCGATCG TCTTTTTTCC CGCGGTTTCT TGCGTTCCCG GGAATTGTTG CTTAATGGTC CAGAAGCAAG AAGAAATGAA TGAGTGTGGT GCTGTAAATG GTGGCAAAGT GGGAACGTCT TCACCACCGC AAGAGAAAGG AAGGAAGAAC AAGAGAAAGT TAGCTGATCC TTCTCCACAA AATGCTGCTT CTTTGACTGA ATTCCCTCGA TATGAGTTAC ATTCACTCAA ATCTCAAAGC ACTTTGTGTG AAAATGACTC GAACGGGCAG CTGAAAGCGG AAGAGTCTGA CTCCGTAGGA TGGGATGATC CCTTTGCTTG TCAACTCGAA CAACTTTTAT CATCAAATTT GCTCACCCTC TTCCGTAGTG CAATGAATCA GATTATGGAT TGTGGGTTTA GTGAGGATGT TGTTCTCAAA GCTATTTCAA GCAGTAGGCT CTACTCTGGG GGAAATGATC TCGTCTCTAA CATTGTTAAT GATACCTTGA GTTTTTTGAA GAGTGGAAAA AATGTTGCTG GTTCGAGAGA CTATGTGTTT GAGGATTTGC AACAGCTTGT TGCCTATACT TTGGTAGAGA AGATAAGTCT TGTTAGGGAG GTTAGACCAT CGCTTTCAAC AGTCGAAGCT ATGTGGAGGC TGTTGATGTG TGACTTGAAT GTTTTGCAAG CTTTTGAAGT GGAAGGAGAT GGATTGGAGG GCTCTTCGGG TTCCAATGCA AGTAAATCAT CGGAATCTCC AGTTTCTGAG TGTAATCCTT CAAAATCTAG TGGCTCGGAT AACCCAAAGG CGCCCATATC CAATACTCAA AGCAATCAGA GTGAGCCAGT CAAATTTGGG AACTTCCCAA ATGTGAACAA CTCCAAAAAT CCTCATGCTA GTGGAGCAAC CCCTGGAAAA GAGGTATTTT CTGTTTCCAC TGCTTCTGGT GAAGGCACTA AAAGTGCATC CCTGACTTCT GTTTCTGATG AAAAATTAGT ATCTTGTCGA AAAGGCCGCA CCAAAAAAGA AATGGCCATG CTACGGCAGA AATCATGTGT GGAGAAGATT AGAACTTATA GCAAAGGTGG TGGCTATAAG ACGGCAAAGT TTGGTGGTTT CCTTGTGGAG AAAAGAAGCA AAGCAGCTTC GGATTTACTG TCCGCACAGG CAAGAAATTC TTCATCGAAG ATTACGACAG ACGTTATGAA AATTCCTTTA GCTGAGAGTA GCAGCACTCT CTCAAACAAT ACTAAGTCAG ATTCGCCTGC ATTAGATGTT AAGGAGCATG TTACTGCATT ACCTGCTAAT AATGCTCCAG CACCAGTAGC TTCAGAAAAG AAGTCCGGTT CCGAGCCTGA AGAAAAGGCT TCTGTGTCTA CAAAGCCAGC ACCAGATTAC TATGCTGCAA TCCCATACGA TGCATCTCTG GGAATATATG TTCCCCGAAA TAAAGGAGAT GAATTAATTT TAAAGCTAGT TCCCCGAATG AAAGATCTGC AGAAAGAATT GCAGGATTGG ACTGACTGGG CTAATCAGAA AGTAAAGCAG GCTACTGTTA GACTTCTTAA GGACCAACCA GAGCTTAAGG CACTAAGAAA AGAGAAAGAA GAGGCAGAAG AGTTCAGAAA AGAGAAGCAG TTATTGGAAG AAAACACTAT GAAAAGGAGA TCTGAAATGG AGTTGGCCTT GAATAACGCA ACCAACCAGC TTGAAAGAAC TAACAACATA ATTCGCAGGC TCGAGCTGGA ACAATCTCTG TTAAAGAGAG AGAGGGAAGC TGCTAATATA AGAGCTTCTG AGTCCGCTGA GAGCTGTAGA GAAGCAAAGG AGAGAGTGCA AATATTGTTG AAGAATGCTC AGTCGTGGGA AGGGCAAAAG GTTTTGTTGC AGGAAGAGCT CAAGAGTCAA AGAGACAAGG TGGCAGAGCT GCAGCAAGAA GTTGCCAAGG CAAAAACCCG ACAAAACCAA ATTGAGGCTA CTTGGAAACA AGAAAAGGCA GCGACGGGGA AACTCACTAC TCAAGCGGCT GCACTAAAGA AAGAGAGAGG GAAACTGGAA GAACTCGGAA AATCAGAAGA AGAGCGGATC AAAACAAAAG CAGAGAACGA CGTGAAATAC TACATTGAGA ACATCAAAAG ACTTGACACC GAGATCTCAA AGCTAAAACT CAAGTCAGAC TGCTTGAAGA TAGCTGCTTT GAAAAAAGGC GTAGACGGTA GCAATGACAA GAGCGGAATG AATCATACCA CCACCACAAA GGCAAACCTG ATGGCAGCAA CAAAAGTATG GGAGAATAAT CACGGGGCAG AGTCGAAAAT CAAAAGAGAG AGGGAATGTG TGATGTGTTT GTCTGAAGAG ATGAGTGTGA TTTTCTTGCC TTGTGCCCAT CAGGTTCTTT GCTCTAAATG TAACCAGCTT CATGAGAAGG AAGCCATGGA GGATTGTCCG TCTTGTCGGG CCAAAATCCA GAGGAGGATT CAGGCTCGTT TCTCCCATGG GTAAAAGCGC TCGGGTTTTG AATCAATATG GCAATGAAGG TTTTGCTTTG GTTTTATATC TTTGGACTGC TCTATTTACA TCTAAATTAC ACACATCTTG TAAAGAGTGA CTTCACAATT TGCTCATTTC TATATTTCCC TCAATAATAA ATGGAAGAAG ACATTCCTAA AC 
Length2762
Protein Sequence
Protein Residue
Map Locationscaffold_6: 21920302.. 21923770
Download Sequence
A.thaliana
AGI-codeAT4G03000.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
17.4642 Ahg494609 Transducin family protein / WD-40 repeat family protein
24.6982 Ahg493786 conserved peptide upstream open reading frame 58
41.1825 Ahg330172 Protein of unknown function (DUF1336)
44.4972 Ahg470271
45.9891 Ahg488062 pyrimidine 2
46.3681 Ahg928368 UDP-Glycosyltransferase superfamily protein
46.7761 Ahg942557 isoamylase 3
50.9117 Ahg928254 P4H isoform 2
51.3809 Ahg490906
56.7627 Ahg486343 Tropomyosin-related
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression