| Annotation |
|---|
| Description | jgi|Araly1|942557|scaffold_603101.1 |
| Sequence |
GATCATTGAA GCAACGAAGA TATGCTTACT TCACCTTCTT CTTCTTCTTC TTCTACATTT GATTCATTCT CTTCCAATTT CTCTCCGGTA CTCACTAATG CCTTCTCTGG CTTCACCATT CCCATGGGAT TGAATTTGAG TAGGAAAGTG ATCGGAGCTC GAGTTTTCTC TCGGAAGGTT AAGGATCGTT CAACGCTTAA GCTTTCTTGT CGTCGTGCAA AAGAACGTGT GGTTGAGGAA GAAGCTTCTA CAATGACGGA GACTAAGCAA TTGTTCAAAG TTTCTACTGG TGAGGTATCT CCTCTTGGTG TGTCTCAAGT CGACAATGGA ATCAATTTTG CTTTGTTTTC TCAGAATGCT ACTTCTGTTA CACTCTGCTT ATCACTTCCC CAAAGTGGTA AGGATGATTT GAATGATGAT GGTATGATTG AGTTGGTTTT GGATCCAAGT GTAAACAAGA CTGGGGATAC TTGGCACATT TGTGTTGAGG AGTTGCCTCT CAATAATGTT CTTTATGGTT ACCGTGTTGA TGGTCCTGGA GAATGGCAAC AAGGGCATCG GTTTGACCAT AGTATTGTGC TTTTGGATCC CTATGCAAAG CTAGTTAAGG GTCGCAGCTC TTTTGGAGAT AGTAGTCAAA AGTTTGCTCA ATTTTATGGA ACTTATGACT TTGAGAGCTC GCCATTTAAC TGGGGAGATG ACTACAAGTT CCCTAACATA CCTGAGAAGG ATCTTGTTAT TTATGAAATG AATGTTCGTG CTTTTACTGC TGATGAATCC AGTGGGATGG ACCCAGCTAT AGGGGGCAGT TACCTCGGTC TCATTGAGAA GATCCCACAC CTTCAAGATC TGGGTATAAA TGCAGTGGAG TTATTGCCAG TGTTTGAGTT TGATGAACTG GAGCTTCAGA GGCGTCCTAA CCCTAGGGAT CACATGGTTA ACACATGGGG TTACTCGACA ATTAACTTTT TTGCTCCGAT GAGCCGTTAT GCTAGTGGTG AGGCAGACCC AGTTAAAGCT TCGAAAGAGC TTAAAGAAAT GGTCAAAGCC TTACATTCTG CTGGTATAGA GGTCATTTTG GACGTAGTTT ATAATCATAC CAACGAAGCA GATGACAAAT ACCCTTATAC CACTTCATTT CGTGGCATAG ACAATAAGGT TTATTACATG CTTGATCCAA ACAACCAACT GCTTAACTTT TCTGGCTGTG GGAATACACT GAACTGTAAC AATCCCGTTG TTATGGAACT AATACTAGAT AGCTTAAGGC ACTGGGTCAC TGAATATCAT GTGGATGGTT TCCGATTTGA TCTTGCTAGT GTGCTTTGCC GAGCAACAGA TGGATCTCCA CTCAGTGCTC CCCCACTCAT TAGGGCAATT GCCAAGGATT CCGTTCTGTC AAGATGTAAA ATAATTGCAG AGCCTTGGGA TTGTGGAGGA TTATATCTAG TCGGGAAGTT TCCAAATTGG GATAGGTGGG CTGAGTGGAA TGGGATGTAC CGGGATGATG TTAGAAGATT TATCAAGGGT GACATTGGTA TGAAAGGAAG CTTTGCTACT CGGGTTTCAG GATCTTCCGA TCTTTACCAG GTTAACCAGC GGAAGCCTTA CCATGGTGTA AATTTTGTGA TCGCACATGA TGGATTCACA TTGCGAGATC TTGTATCGTA CAACTTTAAG CACAATGAGG CCAATGGAGA AGGAGGAAAT GATGGATGTA ATGACAATCA TAGCTGGAAC TGTGGTTTTG AAGGGGAAAC TGATGATGCT CACATCAAGT CTTTACGTAC TCGGCAAATG AAGAATTTTC ATTTAGCTTT GATGATTTCT CAGGGAACAC CAATGATGCT AATGGGAGAC GAATATGGAC ATACGCGGTA TGGTAACAAC AATAGCTATG GACATGATAC CGCTCTTAAT AATTTCCAGT GGAAAGAGCT CGACGCAAAG AAGCAAAACC ATTTCAGGTT TTTTTCGGAG ATGATCAAGT TTCGACATTC ACACCATGTA CTCAAGCATG AAAATTTCCT CACCCAAGGC GAGATTACAT GGCATGAAGA TAATTGGGAC AACACTGAGA GCAAGTTCCT AGCTTTCACT CTCCATGACG GTGTAGGTGG CCGTGACATC TATGTGGCAT TCAACGCCCA CGACTACTTT GTCAAGGCTC TGATTCCACA GCCGCCACCG GAAAAACAAT GGTTCCGTGT GGCTGACACA AACCTCGAGT CGCCGGATGA TTTTGTGAGC GAAGGTGTGG CTGGCGTGGC TGATACCTAC AACGTGGCTC CATTTTCTTC AATCCTTCTC CAGTCCAAGT AAGATAAGCA CTCACACGAG CAGC |
| Length | 2344 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 16826590.. 16831394 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G09020.1 |
| Description | isoamylase 3 |
| TAIR curator summary | Encodes an isoamylase-like protein. Mutant studies show that the gene is strongly involved in starch breakdown. A GUS-protein fusion product was shown to localize to the surface of chloroplastic structures reminiscent of starch granules. In the mutants, the chloroplastic α-amylase AMY3 is upregulated. |
| Alias | [ATISA3][ISA3][isoamylase 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg485582 | dual specificity protein phosphatase (DsPTP1) family protein |
| 2.23607 |
Ahg481034 | cold, circadian rhythm, and rna binding 2 |
| 3 |
Ahg919881 | Pyruvate phosphate dikinase, PEP/pyruvate binding domain |
| 4 |
Ahg485074 | alpha-glucan phosphorylase 2 |
| 4.24264 |
Ahg899427 | Glucose-1-phosphate adenylyltransferase family protein |
| 4.89898 |
Ahg493915 | PQ-loop repeat family protein / transmembrane family protein |
| 5.47723 |
Ahg490829 | phosphoenolpyruvate carboxykinase 1 |
| 7.34847 |
Ahg489545 | |
| 7.34847 |
Ahg928610 | metallothionein 2A |
| 8.3666 |
Ahg472968 | cyclin T 1;3 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|