Detail



ID : Ahg490264

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490264|fgenesh2_kg.6__3398__AT4G02980.1
Sequence
GAAGCATCTA GAAAATGATC CTACTTTCGG TTGGTTCCGC TTCGTCATCT CCGATCGTCG CCGTATTCTC CGTCGCGCTT CTTCTGTTCT ATTTCTCTGA AACTACTCTA GGAGCTCCTT GTCCCATCAA TGGCTTGCCA ATCGTGAGGA ATATTAGTGA CCTTCCTCAA GATAACTATG GAAGACCAGG TCTTTCCCAC ATGACTGTTG CTGGCTCCGT ATTGCACGGA ATGAAAGAGG TTGAAATATG GCTTCAAACA TTTGCTCCAG GTTCAGAGAC ACCAATTCAC AGGCACTCCT GTGAAGAGGT CTTTGTTGTC CTAAAGGGCA GTGGTACTCT GTATCTTTCT GAGACCCATG GAAATTTCCC TGGGAAACCA ATTGAATTTC CTATCTTTGC TAACAGTACA CTTCATATTC CGATCAATGA TGCTCATCAG GTCAAGAACA CCGGTCATGA GGACCTGCAG GTGTTGGTTA TCATATCTCG GCCGCCTATT AAAATCTTCA TCTACGAAGA CTGGTTTATG CCACACACTG CTGCGAGGTT GAAGTTCCCT TACTATTGGG ATGAGCAATG CGTTCAAGAA TCGCAAAAAG ACGAGCTTTA AAGCAAAGTC CGAGGCCAAA ACCAAGCACA CCCTTTAGAT AGTAAAATCA TAGTTGAGGT TTTGTGACAT TACGTAGATA CTGGTAAATT GGCAAGGATT TTACATGAAT GTTGTTGC 
Length728
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT4G02980.1
Descriptionendoplasmic reticulum auxin binding protein 1
TAIR curator summaryAuxin binding protein involved in cell elongation and cell division. ABP1 is ubiquitinated in vitro and in planta by AtRma2.
Alias[ABP][ABP1][endoplasmic reticulum auxin binding protein 1]
Gene coexpression
MR
MR Locus Description
4.47214 Ahg937003 Ribosomal protein S14p/S29e family protein
15.3623 Ahg893810 Cox19-like CHCH family protein
17.2627 Ahg337630 evolutionarily conserved C-terminal region 4
18.6548 Ahg483187 VQ motif-containing protein
38.0263 Ahg496588 DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases
38.833 Ahg914471 G protein coupled receptor
38.8844 Ahg915598 Disease resistance protein (TIR-NBS-LRR class) family
51.3809 Ahg358267 DHBP synthase RibB-like alpha/beta domain
52.2494 Ahg481869 Arabidopsis Inositol phosphorylceramide synthase 3
56 Ahg893401 DP-E2F-like 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression