Detail



ID : Ahg496588

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496588|fgenesh2_kg.8__2404__AT5G63960.1
Sequence
TAGTCTCACT TTCTACTTCT CTCAGACCTC CACGAGCTCA CAAAATCACA CATTGTCTTC TTTTCCCGCT CGCCCAAAGC CATGAATAGA GCCGGTAATT CCAAAAAGCG ACCGCCTCCT TCGAATACCC CACCGGCGGT GAAGCATCGA GCCACTGGTA ATTCAACACC ATCTCCGGCC ATCGGAACCC TAGATGATGA ATTTATGGTG GACGAGGACG TGTTTCTCGA CGAAGCTCTC TTGTACGGCG ACGAAGATGA GGAATCCCTA ATTCTCCGGG ACATTGAGGA GCGTGAATCG CGTTCGTCGG CTTTGGCTCG ACCTCCGCTC TCACCCGCTT ATCTCTCGAA TTCCCAGATT TTCCAACAAT TGGAGATTGA CTCTATAATT TCGGAGAGTC ATAAGGAGCT GTTACCGGGT TCCTCAGGGC AAGCTCCAAT CATTAGGATG TTTGGGGTTA CCAGAGAAGG TAACAGTGTG TGTTGCTTTG TTCATGGATT CGAGCCCTAC TTTTACATTG CTTGCCCTCC TGGAATGGGG CCAGACGATA TTTCTAATTT CCATCAGATT CTTGAGGGAA GGATGAGGGA ATCCAATAAA AATGCCAAGG TCCCGAAATT TGTTCGGCGT ATCGAAATGG TGCAAAAAAG AAGTATTATG TATTACCAAC AGCAAGAATC ACAAACTTTT CTGAAGATTA CAGTTGCATT GCCAACTATG GTGGCAAGTT GTCGCGGCAT CCTTGATAGA GGCTTACAAA TTGATGGATT TGGTATGAAG AGCTTCCAAA CATATGAGAG CAATATTATT TTCGTTCTCC GTTTCATGGT TGACTGCGAT ATTGTCGGAG GAAATTGGAT TGAAGTACCT ACTGGGAAAT ATAAGAAGAA TGCAAGAACT TTGTCATACT GCCAATTGGA GTTCCATTGC CTGTACTCAG ATCTAATCAG TCATGCTGCA GAAGGTGAAT ACTCAAAAAT GGCTCCATTC CGTGTACTAA GTTTCGATAT TGAGTGCGCA GGTCGTAAAG GGCACTTTCC GGAGGCTAAG CATGATCCTG TAATCCAGAT AGCGAACCTT GTTACTCTTC AGGGAGAGGA TCACCCATTT GTACGCAATG TCATGACTCT TAAGTCATGT GCTCCAATCG TAGGCGTAGA TGTCATGTCT TTTGAAACAG AAAGAGAGGT CTTACTAGCT TGGAGGGATT TGATTCGTGA TGTTGATCCG GATATCATCA TTGGTTATAA CATCTGCAAA TTCGATTTAC CTTATCTGAT TGAGAGAGCT GCAACACTGG GAATAGAGGA ATTTCCTCTT CTTGGTCGTG TAAAGAACAG TAGGGTGCGG GTCAGGGACT CAACATTTTC ATCAAGACAA CAAGGAATAA GGGAAAGTAA AGAGACCACA ATTGAAGGAC GATTTCAGTT TGACCTTATT CAGGCAATAC ACAGAGACCA CAAATTAAGT TCTTATTCGC TGAATTCTGT CTCAGCACAC TTTCTTTCCG AGCAGAAATA GGATGTCCAC CATTCTATAA TAACTGATCT CCAGAATGGG AATGCCGAAA CCAGGAGGCG TCTTGCTGTT TATTGTCTGA AGGATGCATA TCTCCCTCAG AGGCTTCTGG ACAAACTGAT GTTTATATAT AATTATGTCG AAATGGCTCG TGTAACTGGT GTCCCTATTT CCTTTCTTCT TGCTAGAGGA CAGAGTATCA AGGTTCTATC TCAGCTTCTT AGGAAAGCTA AACAGAAGAA TCTGGTTCTT CCAAATGCTA AACAGTCAGG GTCCGAACAA GGAACTTATG AAGGCGCAAC TGTTTTAGAA GCAAGAACAG GTTTCTATGA AAAGCCAATT GCAACTTTGG ATTTTGCTTC ACTGTACCCG TCAATTATGA TGGCATATAA TCTGTGCTAC TGCACCTTGG TGACACCTGA AGATGTACGC AAACTGAATC TTCCACCTGA ACATGTCACT AGAACTCCAT CAGGGGAAAC ATTTGTTAAG CAAAGTTTGC AAAAGGGTAT ACTTCCAGAA ATTCTCGAAG AGCTTCTTAC CGCCCGTAAA AGAGCTAAAG CAGATTTAAA GGAGGCTAAG GATCCACTTG AGAAGGCTGT TTTAGATGGT AGACAGTTGG CGTTGAAGAT CAGTGCAAAT TCTGTCTACG GGTTTACGGG AGCCACTAAT GGGCAGTTAC CATGCTTAGA AATATCCTCA AGTGTAACTA GCTATGGTCG TCAGATGATT GAACAGACGA AGAAACTTGT GGAAGACAAA TTCACAACAC TGGGAGGGTA TGAATACAAT GCAGAGGTCA TTTATGGAGA CACGGATTCA GTCATGGTGC AATTTGGAGT ATCGGATGTA GAAGCTGCAA TGAACTTGGG GAGGGAAGCT GCAGAACATA TTAGCGGAAC TTTTATCAAA CCCATCAAAT TGGAGTTTGA AAAAGTCTAT TTCCCATATC TGCTCATTAA CAAGAAGAGA TATGCTGGTT TGCTATGGAC AAATCCTCAA CAGTTTGACA AAATGGACAC CAAAGGAATC GAGACAGTAC GAAGGGATAA TTGTTTACTG GTTAAGAACC TCGTGACTGA GAGTCTTAAC AAAATACTTA TTGATAGAGA TGTTCCAGGC GCAGCTGAAA ATGTTAAGAA AACCATTTCG GATCTTCTCA TGAACCGTAT TGACTTGTCA CTTTTGGTGA TTACTAAGGG TCTAACGAAA ACAGGAGATG ATTATGAAGT TAAATCAGCT CATGGTGAAC TTGCTGAACG CATGCGTAAG AGGGATGCTG CCACAGCGCC AAATGTTGGA GATCGAGTAC CGTATGTTAT CATAAAAGCT GCTAAAGGTG CCAAGGCTTA TGAACGGTCA GAAGATCCGA TCTACGTGCT ACAGAATAAC ATCCCTATAG TCCCAAATTA CTACTTGGAG AATCAGATTA GCAAACCACT TCTTAGGATT TTTGAGCCAG TCCTGAAAAA TGCTAGCAAG GAGCTTCTCC ATGGAAGTCA CACGAGGTCA ATATCAATTA CTACTCCTTC AAACAGCGGC ATAATGAAAT TTGCTAAGAA ACAACTGAGC TGTGTTGGCT GCAAAGTTCC GATCAGCAAT GGAACTCTGT GCTCAAGTTG CAAGGGAAGA GAAGCCGAGT TATACTGCAA AAACGTGTCT CAAGTGGCTG AGCTAGAAGA GGTTTTTGGG AGGCTGTGGA CCCAGTGCCA GGAGTGTCAA GGCTCTCTTC ATCAAGATGT CTTGTGCACC AGTCGAGATT GTCCAATATT TTACCGGAGA ATGAAAGCAC AAAAAGACAT GGCTGTAGCC AGGCAACAAC TCGACCGTTG GAGCTTTTAA TAAGTATTTA GGTTGTTTTT AGCTCTCTTT TTTTTACATT GGTTTCTCCG CTATTAACTT TTCCGTTTGA TTTAGAACTT GTAGGTCTCT TTGGAATGTT TTATGAAAAG GCCTCTTTGG CTTCTTTGTA CGTAGCTTTT GATTAATACA GAAAGAGAAC TCTTCTCGC 
Length3529
Protein Sequence
Protein Residue
Map Locationscaffold_8: 19979388.. 19986802
Download Sequence
A.thaliana
AGI-codeAT5G63960.2
DescriptionDNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg937278 Protein of unknown function, DUF647
2 Ahg477264 RAD3-like DNA-binding helicase protein
3.31662 Ahg472300 DNA-binding bromodomain-containing protein
5.19615 Ahg496305 P-loop containing nucleoside triphosphate hydrolases superfamily protein
12.2474 Ahg490287 Kinase interacting (KIP1-like) family protein
13.1909 Ahg909961
13.4164 Ahg944752 Protein of unknown function (DUF2012)
16.5529 Ahg914471 G protein coupled receptor
17.0294 Ahg488161 Aldolase-type TIM barrel family protein
17.2047 Ahg477583 LUC7 related protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression