Detail



ID : Ahg490326

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490326|fgenesh2_kg.6__3460__AT4G02410.1
Sequence
AAAAAACAGA GCCATGTTCT TCAAGCTCTT TACCATCTTC TTCTTCTTCG TCCTACTCTC TCAACCCCTA AAGTCATCTT CTCAAATTCT CGACTTCACT TACAATAGCT TCCATCGTCC ACCAACTAAC ATATCCATCC AAGGGATTGC CACAGTCACA CCAAACGGTA TCTTGAAACT AACCGACAAA ACCGTGATAA GTACCGGTCA CGCTTTCTAC ACCGAACCAA TCCGGTTCAA AGATTCTCCA AACGACACTG TCTCGTCCTT CTCCACAACC TTCGTCATCG GTATCTACTC TGGGATCCCG ACGATTAGCG GCCACGGCAT GGCCTTTTTC ATCGCTCCTA AACCCATCCT CTCATCCGCC ATGGCCAGCC AATACCTCGG TCTCTTTAAC AGCACCAACA ACGGTAACGA TACGAATCAT ATACTCGCTG TCGAATTTGA TACGATCATG AACCCTGAGT TCAATGATAC GAACGATAAC CATCTGGGAA TCAATATAAA TAGCTTGACA TCGGTTAAAA GCTCGCCTGC TGGGTATTGG GACGAGAACG GTCGGTTTAA CAATCTGACT TTGATAAGTC GTAAACGGAT GCAAGTTTGG GTTGATTACG ATGATCGTAC TAATCAAATC GATGTAATTA TGGCTCCGTT TGGTGAGGTT AAACCTAGGA AACCGCTTGT TTCTGTTGTT AGAGATCTAT CTTCGATTTT CTTGCAAGAT ATGTACTTAG GTTTCTCGTC TGCGACTGGT TATGTTTTGT CGGAACATTT TGTTTTTGGT TGGAGTTTCA TGGTGAAGGG GAAGACAGCT CCGCCGTTGA CTTTATCGAA AATTCCGAAA TTTCCGAGGG TCGGGCCAAC GAGATTACAG AGGTTTTATA AGAACCGGAT GCCGTTATTT TCCCTCTTGT TGATTCCTCT CTTGTTTGTT GTCTTGCTTA TCTTCCTCGT GCGCTTTATC GTGAGGAGGA GGAGAAAGTT TGCGGAGGAG TTTGAAGATT GGGAAACAGA ATTTGGGAAG AACCGGTTAA GGTTCAAGGA CTTGTACTAT GCCACTAAAG GGTTCAAGGA TAAGGACCTT CTTGGATCAG GTGGGTTTGG GAGGGTTTAT AGAGGTGTAA TGCCGACGAC GAAGAAGGAG GTTGCCGTGA AAAGAGTGTC GAATGAATCT CGACAAGGGT TGAAAGAGTT TGTGGCTGAG ATTGTGAGTA TTGGTAAGAT GAGTCATCGG AACTTAGTTC CTCTCTTGGG TTATTGCCGT CGTAGAGACG AGCTTCTTCT GGTGTATGAT TACATGCCCA ATGGAAGCTT AGACAAGTAT TTGTACGATT GTCCGGAGAT AACTCTGGAT TGGAAACAGA GGTTTAATGT AATTATAGGT GTGGCGTCGG GCTTGTTCTA TCTCCACGAG GAATGGGAAC AAGTGGTGAT TCACCGCGAC ATCAAAGCCA GCAACGTCTT GTTAGACGCG GAGTACAATG GGAGACTCGG GGATTTTGGT TTAGCTCGGT TGTGCGATCA CGGTTCGGAT CCTCAAACTA CGCGTGTCGT TGGAACTTGG GGATACCTAG CCCCCGATCA TGTCAGAACA GGACGGGCCA CAACCGCTAC TGATGTTTTT GCGTTTGGGG TGCTCCTACT AGAAGTTGCG TGCGGCAGAC GTCCTATCGA GATTGAGATT GAGAGTGATG AGAGCGTCTT GCTCGTGGAT TCGGTTTTTG GGTTTTGGAT AGAGGGAAAC ATCTTGGATG CTACGGATCC GAATCTAGGA TTGGACTATG ACCAAAGAGA GGTCGAAATG GTTTTGAAGC TAGGTTTGTT ATGCTCTCAC TCCGACCCAC AAGTTAGACC AACAATGAGA CAAGTGCTAC AGTATCTAAG GGGAGATGCA ATGTTACCAG ATGTATCGCC GTTGGACTTC CGTGGGAGTG GGAAAATGTT GGGAATCCAC CACGGATTTA GTGAGTTAAG CACATTTACC AGTGGATCTT CGATTGCTTA TTCTATACTC TCTGGCGGGA GGTGATTTTG AATATTAGAA CAGTTATATG TCTTTCATAG TTTACATTAC ATATGTAGAA AGAAATTGTT TGCACATGAT AGGGACCATG TTGATCTTTA TGATGTTGTA TTTCAAAGTA GAGGTGGTTG ATAAGACATG GTTATAGAAG TATAATTTTG 
Length2190
Protein Sequence
Protein Residue
Map Locationscaffold_6: 22266589.. 22268806
Download Sequence
A.thaliana
AGI-codeAT4G02410.1
DescriptionConcanavalin A-like lectin protein kinase family protein
TAIR curator summary
Alias[AtLPK1][LPK1][lectin-like protein kinase 1]
Gene coexpression
MR
MR Locus Description
6.7082 Ahg940372 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
7.07107 Ahg489474 Major facilitator superfamily protein
9.16515 Ahg491286 Protein phosphatase 2C family protein
10.9545 Ahg492972 heat shock transcription factor A4A
12.6095 Ahg495340 Heavy metal transport/detoxification superfamily protein
15.2315 Ahg934965 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
16.5831 Ahg476856 Target of Myb protein 1
19.7484 Ahg482857 WRKY DNA-binding protein 33
20.2978 Ahg495588 GDSL-like Lipase/Acylhydrolase superfamily protein
21.2132 Ahg477807 RING/U-box superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression