Detail



ID : Ahg491286

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|491286|fgenesh2_kg.7__719__AT4G33920.1
Sequence
TCACGCGGTT TTTTTTTTTC TTTATCCACC AACTCAACAC ACACACGAAT CCCTTAAAAC CGATCAGATC AAACAAAAAC GAACGAATCA AAATTCAATC AGAAGAAACC TTTCGATTTC TCTCATCCAA TCGAATCCGA AATCTTGTTC ATTTTGTTCT CTTTCTCTCT ACTCCACTGC ACTCAGAATC TTTCTGTATA GAAAAACCCT AAGTAGGTGA TGTTGCGAGC TTTAGCACGG CCTCTCGAAC GGTGTTTGGG AAGCAGAGCT AGTGGTGATG GTTTACTCTG GCAATCGGAA TTGAGACCTC ACGCCGGCGG TGATTATTCG ATCGCGGTGG TTCAAGCCAA TTCCAGGCTT GAAGATCAGA GCCAGGTTTT CACATCTTCT TCTGCTACTT ACGTCGGCGT ATACGATGGT CATGGTGGAC CTGAAGCTTC TAGATTCGTT AATAGACATC TCTTTCCTTA TATGCACAAA TTTGCAAGAG AACATGGGGG ACTATCTGTA GATGTTATTA AAAAAGCATT CAAAGAAACT GAAGAGGATT TTTGTGGTAT GGTTAAACGA TCACTTCCCA TGAAACCGCA AATGGCTACT GTAGGATCTT GCTGTCTTGT TGGTGCAATC TCTAATGACA CACTGTATGT TGCGAATCTT GGGGACTCGA GAGCCGTTCT TGGAAGCGTT GTTTCAGGGG ATGATAGTAA TAAGGGTGCC GTAGCTGAAC GGTTATCTAC TGATCATAAT GTTGCTGTTG AAGAAGTGAG AAAGGAGGTT AAGGCACTTA ACCCCGATGA TTCACAAATC GTCATATACA CACGTGGAGT TTGGCGGATC AAAGGCATTA TTCAGGTATC GAGATCAATT GGGGATGTAT ACTTGAAAAA ACCAGAGTAT TACAGGGACC CGATTTTCCA GCAACATGGA AATCCCATTC CTTTGAGGAG ACCAGCGATG ACAGCCGAAC CCTCCATTAT AGTAAGGAAG CTTAAGCCAC AGGACTTGTT TCTGATATTT GCATCAGATG GTCTCTGGGA ACATCTTAGT GATGAAACAG CCGTAGAAAT CGTCCTCAAA CACCCAAGAA CTGGGATTGC ACGAAGACTT GTAAGAGCAG CTCTAGAAGA AGCGGCAAAG AAGAGAGAAA TGAGATATGG AGACATAAAG AAAATAGCCA AAGGAATTCG ACGACATTTC CATGACGACA TAAGCGTTGT TGTAGTTTAT CTAGATCAAA AGAAAACCAG TTCATCGAAT GGTAAATTGG TCCAGCAAGG AGGCATCACC GCTCCACCGG ATATCTACTC GTTACACTCT GATGAAGCAG AGCAACGACG GTTACTGAAT GTGTTATACT GACCCTTTGA TGATGGTAAA ATGGTTGATT GGGAAAGATC CGAATAGGGA GAAAACTTGT TTACATATTT GTTTATTTGT TTTTCTACGA AGAATTGTTT TATTTTATTT TATTGAATAG TGGAGTTGGA TTTGTATATT CTTTTACCAG CAAAGAAGGT CGAAACCCTT TTCTTTTGGG GCAAAGCAGT TTTGCTTTTG ACAAACAATA CTCTTGTAAG AAATCTAGTG TGAGAAACCG TTGAGGACA 
Length1609
Protein Sequence
Protein Residue
Map Locationscaffold_7: 2852450.. 2854750
Download Sequence
A.thaliana
AGI-codeAT4G33920.1
DescriptionProtein phosphatase 2C family protein
TAIR curator summary
Alias[APD5][Arabidopsis Pp2c clade D 5]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg485035 zinc finger (C3HC4-type RING finger) family protein
4.24264 Ahg496763
6.7082 Ahg910871 Protein of unknown function (DUF761)
7.34847 Ahg484976 expansin-like A1
8.88819 Ahg486400 Protein kinase superfamily protein
9.16515 Ahg490326 Concanavalin A-like lectin protein kinase family protein
11.225 Ahg949125 respiratory burst oxidase homologue D
11.3137 Ahg476734
13.4164 Ahg939877 Duplicated homeodomain-like superfamily protein
13.6748 Ahg481243 tetraspanin8
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression