| Annotation |
|---|
| Description | jgi|Araly1|490346|fgenesh2_kg.6__3480__AT4G02260.1 |
| Sequence |
CTTCTTCTTC TTCTTCCTCT TCACATCACT GTGTGCGTCT CTCTCTGTTC TATCTTTCCG AAATCTTCTC TATCCTAATT TGAACTCGCC TCTTCTTCGT AAAGAGTTCT CCATCTCCGT GTGATTTCGG AATCTGGAGA TTTTGAATTT CTTGTTCGAA TCAATCAAAT GGTGGATCGA TTTAGTTCGA TTGCTTTATC TCATTAGCAA TGACTTCTGC TTCTTCCATG TCCGTGTCTG TGGAATGTGT GAACATATGT AATCTAACGA AAGGAGATGG GAATGCAAGA AGCGATTGCA ATGCTCTCTC CTGTGCTTGG AAAGCACCAA GAGCGTTAAC TGGGTTTCTA GCTACCACTG CTCATCCACC TGTGTGTTCT TTGTACTCAT GTGGCAGAAA TGGAAGAAAG AGCAGAATGA AAGCTTGCGC CTGGCGGAGG TATGAATATG AAGTAGGCTT TTCTGAGGCT CCTGACTTTG TAAATGTGAG AAATATCTTG AAGTCCAAAT TATCTTGTGG TGGCCATAAA AGATGGGAAC TGTATTGCGT ACCAGCTGAA TCTTCTGGTG CATCTGATGA TGTTACCGTC GAAACATTGT GGGAGGACCT TTTCCCATCA ATATCTTACC TACCCTGTAA AGAATTAGAA TTTGTTCAAA AGGGCCTTAA GTTAGCGTTT GAGGCACATC ACGGTCAAAA GAGACGTAGT GGGGAACCAT TCATTATACA TCCCGTTGCA GTTGCTCGTA TCCTTGGGGA ACTTGAATTG GATTGGGAGT CTATTGTTGC TGGATTACTA CATGACACAG TCGAGGATAC AAATTTCATT ACTTTTGAAA AGATAGAAGA AGAGTTTGGT GCAACTGTGC GTCACATCGT AGAAGGGGAG ACCAAGGTGT CAAAACTGGG GAAGTTAAAG TGTAAAACAG AAAGTGAATC AATACAAGAT GTAAAAGCAG ATGATTTGCG GCAGATGTTT CTGGCGATGA CAGACGAGGT CCGTGTCATT ATTGTCAAAC TAGCTGACCG GTTGCATAAT ATGCGAACTC TCTGCCACAT GCCTCCCCAT AAGCAGTCCA GCATTGCAGG GGAGACTTTG CAGGTCTTTG CTCCTTTAGC GAAATTGCTT GGAATGTATT CGATAAAGTC GGAACTGGAA AATCTATCTT TCATGTACGT AAGTGCTGAG GATTATGATA GAGTCACAAG CAGGATCGCT AACCTCTACA AAGAGCATGA AAAAGAACTC ACTGAGGCAA ACAGAATTTT GGTGAAAAAG ATTGAAGATG ATCAGTTTCT GGACCTTGTG ACTGTGAATA CTGATGTTAG ATCTGTTTGC AAGGAAACTT ACAGCATCTA CAAAGCTGCG CTCAAATCAA AAGGATCAAT TAATGATTAC AACCAGATTG CCCAGCAGTT ACGGATTGTT GTAAAGCCAA AACCTTCTGT GGGGGTCGGG CCTTTGTGCA GCCCACAACA GATATGCTAT CACGTTCTTG GGCTAGTTCA TGAGATTTGG AAACCAATTC CCCGAACTGT AAAAGATTAC ATTGCAACCC CGAAGCCTAA TGGCTACCAG AGCCTCCATA CTACTGTGAT TCCGTTCTTG TATGAGAGTA TGTTCCGACT GGAGGTTCAG ATCAGAACCG AGGAGATGGA CTTAATTGCT GAAAGAGGCA TTGCTGTTTA CTATAATGGC AAGGCTCTTT CTGCTGGATT AGTTGCAAAT GCGGTTCCTT TAGGTAGAAA TTCAAGGGGG AAGACGGGTT GTCTCAACAA TGCAGATTTT GCACTCAGGA TTGGGTGGCT AAATGCAATA AGGGAATGGC AAGAGGAGTT TGTGGGTAAC ATGAGCTCTA GAGAATTTGT GGATACCATT ACGAGGGATC TTTTAGGTAG TCGTGTGTTT GTATTCACAC CTAAAGGAGA GATAAAAAAC CTTCCGAAAG GGGCCACCGT TGTTGACTAC GCTTATCTGA TTCACACGGA AATCGGAAAC AAGATGGTAG CAGCAAAGGT CAATGGTAAT CTTGTTTCCC CAACTCACGT TCTTGAGAAT GCTGAGGTCG TGGAGATAGT CACTTACAAC GCCCTCTCAA GTAAATCTGC TTTCCAGAGA CATAAACAGT GGTTGCAACA TGCCAAAACA AGGAGTGCAA GACACAAGAT TATGAGGTTC CTAAGGGAGC AAGCTGCACA ATGTGCTGCC GAAATTACCC AAGATCAAGT GAATGACTTT GTGGCGGACT CTGATAGTGA TTTGGAAGAT CTCACAGAAG ATTCGAGAAA GAGCCTACAA TGGTGGGAGA AAATCCTCGT CAATGTTAAG CAATTCCAGT CACAAGACAA AAGTAGAGAT ACAACACCCA CTCCTCAAAA TGGAAGCGTT TGGGTCCCAA AGGTAAATGG AAAACACAAC AAAGCCATAA AAAACTCGAG TTTAGATGAG CCAGAGTTCC TCCTACCCGG AGATGGAATT GCCAAGATTT TACCTGCTAA CATCCCTGCT TATAAAGAAG TGTTGCCCGG CTTAGACAGT TGGCGAGACA GTAAAATTGC CACATGGCAT CATCTCGAAG GTCACTCCAT CGAATGGTTA TGTGTAGTAT CCATGGATCG CAAAGGCATA ATCGCAGAGG TTACAACAGT TCTCGCAGCT GAAGGCATCG CAGTGTGTTC TTGCGTGGCC GAGATTGACA GAGGAAGAGG ATTAGCAGTA ATGTTGTTTC AAATAGAAGC AAATTTTGAA AGTTTGGTTA GTGTTTGCGC TAAAGTGGAT CTAATATTGG GTGTATTGGG ATGGTCGAGT GGTTGTAGCT GGCCAAAATC AACAGATAAT GCTCAAGTTC TTGAGTGTTA AAGCCAAAGG ACTCACGTTC TTGGCCATGA AGTTTTGTCA TGTTCACTGG AAAAATAAGC AAACTGAAGA AGAGAGTCTG GTTGCTCCAT GTAGAGGTAG AGAGCACTTA TAATATTCTT GAAAATATAT ATCATTCTGT TTTGAAAAAA AAAAAAAAAA GAGAGTCAAA TTCTTTTAGA TGTGTTATGT TCAATAAATC AAGGTCATTG TATATAAAGA CCAAAAGAGT GGGATGAACA TACGATGTAA TATGTAGATA CTCCTGTAAA ACATATACTT GCACATAGAA AAAAAAA |
| Length | 3157 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 22350501.. 22356765 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G02260.1 |
| Description | RELA/SPOT homolog 1 |
| TAIR curator summary | |
| Alias | [AT-RSH1][ATRSH1][RSH1][RELA-SPOT HOMOLOG 1][RELA/SPOT HOMOLOG 1][RELA/SPOT homolog 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg945103 | phosphofructokinase 1 |
| 8 |
Ahg902795 | WD40/YVTN repeat-like-containing domain;Bromodomain |
| 9.48683 |
Ahg481099 | DNAJ heat shock family protein |
| 11.9583 |
Ahg905826 | zinc-dependent activator protein-1 |
| 12.4097 |
Ahg315745 | Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains |
| 13.6382 |
Ahg926152 | Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein |
| 14.4914 |
Ahg477721 | RNA-binding KH domain-containing protein |
| 15.2971 |
Ahg480378 | |
| 16.0935 |
Ahg476682 | Sec14p-like phosphatidylinositol transfer family protein |
| 17.2337 |
Ahg482124 | glucan synthase-like 3 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|