Detail



ID : Ahg477721

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477721|fgenesh2_kg.3__422__AT3G04610.1
Sequence
ACCCGCCTCC ATTGTTACCG GAATCTCTCT CTCTCTCCGC CGAACCTCTT CGATTCAAGT TTCCGTTTAT CACTCTACTA CTGTTTAAGG TTCCATTGAT ACCACCGCTC TAGTCATGGC TGAAGCTGAA GATCAGCAAA ATTTTGTTGC ACACAATGGA GATCAGGTAC CAGCTCAGGG GTTAGATGAG GTGCATAATG GGTTACCGTA CCAGGTTCAC CAACCATACG AGGTATCAGA TCCGATTCTT GAACCTCAGC AGTACGAGGT ACCAGATCAG ACTCTTGAAC CTCAGCAGTA CGAGCTACCA GATCAGACTC TTGAACCTCA GCAGTACGAG GTTCATGATC AATTAGAGTA TCAACAATAC CAGTTGCAGG ACCAGACTCA TGAAGATGTC CAAGATCAGC CGCAAGATGA CCTACAATAT CAGCCACAAG ATCAGGAGCA GTATCAGTTA CAAGACGAGG CTCATGATCA GGCCCAGTAT CAGGCAGAAG GTGAGGCACA AGATCACAAT GGTGATGATG TGCAAGATAA AGTAGAAGAT GAGGAAGGAA TTTCTGAGTC TCTACAGAAA TCAGAGTCTG AAGAAGGTGC AACAGTTGGA GGTGAGGAGA AGAGGTGGCC GGGATGGCCC GGAGAGACGG TCTTCCGCAT GCTGGTTCCT GCACAGAAAG TGGGTAGTAT CATTGGTCGC AAAGGTGATG TCATTAAGAA AATAGTTGAG GAGACAAGGG CTCGAATAAA GATTCTCGAT GGTCCTCCAG GCACAACCGA AAGAGCTGTT ATGGTTTCTG GTAAAGAAGA GCCCGAATCA TCTCTACCAC CTTCTATGGA TGGCCTTCTT AGAGTGCACA TGCGGATAGT TGATGGTTTG GATGGTGAAC CTTCTCAAGC CCCTCCGGCT TCAAAGGTGT CAACAAGATT ACTAGTCCCA GCATCTCAGG CTGGAAGTTT GATTGGAAAA CAGGGAGGAA CAGTTAAAGC TATTCAAGAA GCATCCGCTT GTATAGTCAG AGTTCTTGGA TCAGAGGATT TGCCTGTTTT TGCTCTTCAA GACGATAGGG TTGTTGAAGT TGTGGGGGAA CCAACAAGTG TTCATAAAGC CTTGGAGCTG ATTGCATCAC ATCTAAGAAA GTTCTTGGTT GATCGTAGCA TCATCCCATT CTTTGAAAAT CAGATGCAAA AGCCAACTCG CCAAATGGAT CATATGCCAC CACCACATCA GGCATGGGGT CCTCCTCAAG GTCATGCCCC AAGTGTTGGT GGAGGAGGCT ATGGTCACAA CCCACCTCCA TATATGCAAC CACCTCCTAG ACATGATAGT TACTATCCTC CTCCTGAGAT GCGTCAACCT CCAATGGAGA AACAGCCTCA TCAAGGTATA TCTGCATATG GTAGAGAGCC TCCTATGAAT GTGCACGTAT CATCAGCCCC ACCAATGGTC GCTCAGCAAG TTACGCAGCA AATGCAGATT CCACTTTCTT ATGCTGATGC TGTAATTGGG ACATCAGGTT CAAACATAAG CTACACTAGA CGTCTTAGTG GAGCAACAGT AACTATTCAG GAGACCAGGG GAGTACCTGG TGAAATGACT GTTGAGGTTA GCGGAACTGG CTCACAAGTC CAAACTGCTA TGCAGCTAAT TCAGAACTTC ATGGCTGAAG CTGGAGCGCC GGCACCAGCA CAGCCTCAAA CTGTAGCACC AGAGCAGCAA GGCTATAACC CATACGCAAC ACACGGCTCA GTCTACGCAG CAGCTCCAAC AAACCCGCCT GGAGGATACG CTACAGATTA CAGCTCAGGC TACGGTTACT GATGAAAGAT TTTAAGTTTC TTTAGAATGT TTTACTAGTA GTTGCAAGCA AGAGTGAAAA ACGCTAGATG CCTAATTGAG TATATGCTGT TATTAGCGAG CGCCCTGTGT ACTGAGAATC AATTATTATT ATATCAGTTG TTTTGAGACT TCTTCATTTG TGTACTGTTC AAAACATTAG TCTACCCGGA AATTTTCTTT ATAT 
Length2024
Protein Sequence
Protein Residue
Map Locationscaffold_3: 1498807.. 1503174
Download Sequence
A.thaliana
AGI-codeAT3G04610.1
DescriptionRNA-binding KH domain-containing protein
TAIR curator summary
Alias[FLK][flowering locus KH domain]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg902467
3.4641 Ahg494201 binding
4.24264 Ahg483719 DEA(D/H)-box RNA helicase family protein
5.19615 Ahg476840 eukaryotic translation initiation factor 2 (eIF-2) family protein
5.2915 Ahg488686 Protein kinase family protein
6.32456 Ahg480309 ARM repeat superfamily protein
6.7082 Ahg470503 Helicase protein with RING/U-box domain
8 Ahg474047 stomatal cytokinesis defective / SCD1 protein (SCD1)
11.8322 Ahg485225 DEK domain-containing chromatin associated protein
13.0767 Ahg489218 XS domain-containing protein / XS zinc finger domain-containing protein-related
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression