| Annotation |
|---|
| Description | jgi|Araly1|490357|fgenesh2_kg.6__3491__AT4G02150.1 |
| Sequence |
ACTCTCTCAT TAATCGAACT TCGTGTGTTA AAAATCCTCC GATCGTTGAT TCTCTTCCGA TTTCGATTTG ATTTAGCGGC GATGTCTCTC AGACCTAGCG CGAAGACGGA GGTACGACGG AACCGGTACA AAGTTGCGGT CGATGCGGAG GAAGGACGGC GGAGGCGAGA GGATAACATG GTTGAGATCA GGAAGAACAA GAGAGAGGAA AATTTGCAGA AGAAGCGACG CGAGGGACTC ACGTCTTCTA TGGCTTTTGG CTCAGCCGCG GGACAAACGG AACAGGATCT TTCTTCAGCG AAGCAATTGA AAGATAATCT ACCAGCTATG GTTGCTGGAA TCTGGTCAGA GGATAGCAAC TCACAACTGG AGGCAACAAA TCTCTTGCGG AAACTTCTTT CGATTGAGCA AAACCCTCCT ATCAATGAAG TTGTACAATC TGGTGTTGTT CCTCGTGTTG TGAAGTTTCT TTCCAGGGAT GACTTTCCCA AACTTCAGTT TGAGGCAGCT TGGGCGCTCA CCAACATTGC TTCAGGGACA TCAGAGAACA CAAATGTCAT CATTGAAAGT GGTGCTGTCC CGATATTCAT CCAACTTCTC AGCTCTGCTA GTGAAGATGT CCGCGAACAG GCTGTTTGGG CACTGGGAAA TGTGGCTGGA GACTCACCAA AATGCCGTGA TCTAGTCCTA AGCTATGGTG CCATGATGCC TCTTCTGACT CAATTCAATG AGAATACAAA GCTTTCAATG CTGAGGAATG CTACATGGAC ATTATCAAAC TTCTGCAGAG GGAAGCCCCC GCCTTCTTTT GAACAGACAC AACCAGCTTT ACCAGTTCTT GAGCGCCTTG TGCAATCAAT GGATGAAGAA GTTCTCACAG ATGCATGCTG GGCTCTGTCA TACCTCTCGG ATAACTCAAA CGACAAAATA CAAGCAGTCA TCGATGCAGG AGTTGTCCCT CGCCTCATCC AGCTCTTAGC TCATTCGTCA CCATCAGTGC TGATTCCCGC TCTTCGTACA ATTGGAAATA TTGTAACCGG CGATGATCTA CAGACTCAGA TGGTTCTCGA CCATCAAGCG CTTCCTTGTC TTTTGAACCT TCTAAAAAAC ACTTACAAGA AGAGTATCAA GAAGGAAGCT TGCTGGACTA TCTCAAACAT TACAGCTGGG AATGCAAATC AGATACAAGC AGTGATTGAA GCAGGTATAA TCCAGTCTCT TGTTTGGGTG CTTCAAAGTG CAGAGTTCGA AGTAAAAAAA GAAGCTGCTT GGGGAATCTC AAATGCTACT TCTGGTGGCA CTCATGATCA AATCAAGTTT CTAGTGAGCC AAGGCTGTAT CAAACCTATA TGCGATCTCC TTACTTGCCC AGATCTGAAA GTCATAACGG TTTGCTTAGA AGCACTAGAG AACATTCTCG TGATTGGAGA GGCAGAGAAG AACTTAGGTC ATACAGGAGA CGACAACCTC TACGCTCAAA TGATTGACGA AGCAGAAGGG TTAGAGAAGA TTGAGAATCT TCAGAGTCAT GACAACAATG ATATATATGA AAAAGCCGTG AAGATCCTTG AAACCTTTTG GACTGAAGAC AATGAAGAAG AAGGCAACGA TGAGAATCAT GCTCCACAAT CTGGTTTCCA GTTCGGAAGC ACTAATGTTC CTCCTGGTCA ATTCAACTTT ATTTGAAAGG TAAAAAAGTT GAAAGTTGCT TGGACTTTTT AAGTAAGCCA CATAT |
| Length | 1735 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 22402889.. 22405839 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G02150.1 |
| Description | ARM repeat superfamily protein |
| TAIR curator summary | Encodes IMPORTIN ALPHA 3. Mutant plants act as suppressors of snc1 response and salicylic acid accumulation. Located in the nucleus. Involved in protein import. Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype. |
| Alias | [ATIMPALPHA3][IMPA-3][MOS6][IMPORTIN ALPHA 3][IMPORTIN ALPHA ISOFORM 3][MODIFIER OF SNC1, 6] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2 |
Ahg942264 | Threonyl-tRNA synthetase |
| 2.23607 |
Ahg315245 | disease resistance protein (TIR class), putative |
| 2.82843 |
Ahg474517 | 20S proteasome alpha subunit E1 |
| 4.89898 |
Ahg358798 | NADH-ubiquinone oxidoreductase-related |
| 5.19615 |
Ahg919721 | RAB GTPase 11C |
| 5.47723 |
Ahg934879 | Protein kinase family protein with ARM repeat domain |
| 6.9282 |
Ahg479051 | NUP50 (Nucleoporin 50 kDa) protein |
| 7.14143 |
Ahg471093 | shaggy-like protein kinase 41 |
| 7.2111 |
Ahg474789 | embryo defective 3012 |
| 7.2111 |
Ahg941384 | tonneau 2 (TON2) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|