Detail



ID : Ahg474517

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474517|fgenesh2_kg.1__4471__AT1G53850.2
Sequence
TTGTTTTTCT AGGGTTTTGA TTCCGTTGTG CGAAAGACTT AGAGGTTTTG CAGATCGAAA TCGCAAAAGA AGAAGAAGAT GTTTCTCACT AGAACTGAGT ATGACAGAGG AGTCAACACT TTTTCTCCAG AAGGAAGGCT GTTTCAAGTG GAATATGCCA TTGAAGCTAT CAAGCTTGGT TCTACTGCAA TTGGAGTAAA GACAAAAGAA GGAGTTGTGC TCGCTGTTGA GAAGCGTATC ACTTCGCCAT TGCTGGAACC GAGCAGTGTG GAGAAGATTA TGGAAATTGA TGACCATATT GGTTGTGCTA TGAGCGGTTT AATTGCTGAT GCGCGAACAC TTGTTGAGCA TGCTAGAGTT GAGACTCAAA ACCATAGATT CTCGTACGGT GAGCCGATGA CTGTAGAGTC CACAACACAA GCGCTGTGTG ATCTGGCTTT ACGATTTGGT GAAGGAGATG AAGAATCAAT GTCTCGTCCA TTTGGAGTAT CACTTCTCAT TGCTGGTCAT GATGAAAACG GACCAAGCTT GTACTACACA GATCCTTCAG GAACATTCTG GCAGTGCAAT GCAAAGGCAA TTGGTTCAGG GTCAGAAGGA GCTGATAGCT CTCTTCAAGA GCAATTTAAC AAAGATTTGT CTCTACAAGA AGCTGAGACT ATCGCTGTAT CTATCCTCAA GCAAGTTATG GAAGAAAAGG TGACTCCAAA TAATGTGGAT ATTGCCAAGG TAGCACCAGC TTATCATCTC TACACTCCCC AAGAAGTCGA AGCAGTCATC GCTCGTCTAT GATGGAAAAA TCTCAATTTG GGTAATTTAC CTATCCGCTT GTGTCCCAAA ACTTGTTACT TTTGTCTGTT AGATTGAGGA TTCATATCAG ATTTTTAGTC TGTTGTGTAA GAGAATCTTT TGTTTGTCTC CCATGTCATT CAATAACCTC TCGGATTTGT GATTAGAAAA TTTCCTTTCC TACC 
Length974
Protein Sequence
Protein Residue
Map Locationscaffold_1: 27417257.. 27419160
Download Sequence
A.thaliana
AGI-codeAT1G53850.1
Description20S proteasome alpha subunit E1
TAIR curator summaryEncodes alpha5 subunit of 20s proteosome involved in protein degradation.
Alias[ATPAE1][PAE1][ARABIDOPSIS 20S PROTEASOME ALPHA SUBUNIT E1][20S proteasome alpha subunit E1]
Gene coexpression
MR
MR Locus Description
1 Ahg496130 RNA-binding (RRM/RBD/RNP motifs) family protein
2.82843 Ahg478776 transmembrane nine 7
2.82843 Ahg490357 ARM repeat superfamily protein
3.87298 Ahg911413
4.24264 Ahg470311 Small nuclear ribonucleoprotein family protein
4.89898 Ahg356397
5.91608 Ahg487662 Succinyl-CoA ligase, alpha subunit
7.48331 Ahg491904
8 Ahg945034
8.3666 Ahg486758 Late embryogenesis abundant protein (LEA) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression