| Annotation |
|---|
| Description | jgi|Araly1|490475|fgenesh2_kg.6__3609__AT4G00900.1 |
| Sequence |
ACAAGAAGAA AAGAACCGTT TTTGAGTAGT TACAAAGTAA AGCTTTTGAG AACCAATGGA GGAAGAGAAG TCGTTCTCTG CGTGGTCTTG GTCTGTTGAG CAATGTCTGA AAGAGTACAA GACAAGACTA GACAAGGGTT TAACCAGTGA AGATATCCGA TTCCGCCGTC AAAAGTACGG TTACAACGAG CTCGCTAAGG AGAAAGGCAA GCCCTTATGG CATCTTGTAT TGGAACAGTT TGACGATACG CTTGTGAAGA TTCTTCTCGG TGCTGCGTTT ATCTCTTTCG TTTTAGCCTT TTTAGGTGAA AGCGAGGAAC ATGGCTCAGG TTCAGGGTTC GAGGCCTTTG TTGAGCCTTT TGTGATTGTT TTGATTCTGA TTTTAAACGC TGTGGTTGGT GTGTGGCAAG AGAGTAATGC TGAGAAAGCA CTCGAGGCTC TTAAAGAGAT GCAATGTGAA TCTGCAAAGG TTTTGAGAGA TGGGACCGTG TTACCTAATT TGCCTGCTAG AGAGCTTGTT CCAGGGGATA TAGTGGAGTT AAATGTAGGA GATAAAGTCC CTGCTGATAT GAGAGTTTCC GGTTTGAAAA CATCGACTTT AAGACTCGAG CAAAGCTCGT TAACCGGTGA AGCAATGCCG GTTTTGAAAG GAGCGAATCC TGTTGTCACC GATGATTGTG AGCTGCAAGG GAAAGAGAAT ATGGTTTTCG CGGGAACAAC GGTTGTTAAC GGAAGCTGCG TTTGCATTGT GACGAGTATC GGTATGGATA CGGAAATCGG AAAAATACAG ACGCAGATTC ACGAGGCGTC GCTTGAAGAG AGTGAGACTC CGTTAAAGAA GAAGCTAGAC GAGTTCGGGA GTAGATTGAC TACAGCTATC TGCATTGTCT GTGTTCTTGT GTGGATTATT AACTACAAGA ACTTTGTTTC TTGGGATGTT GTGGATGGCT ATAAACCTGT GAATATCAGG TTTTCATTCG AGAAATGCAC TTACTACTTC AAAATCGCGG TTGCTCTAGC CGTGGCAGCA ATTCCTGAGG GTTTACCTGC TGTGATCACG ACATGTCTAG CTTTAGGGAC AAAGAAAATG GCGCAGAAGA ACGCAATAGT GAGGAAGCTT CCGAGTGTAG AGACACTCGG TTGCACAACT GTTATCTGTT CAGACAAAAC CGGGACTTTA ACAACAAACC AGATGTCTGC AACCGAATTC TTCACATTAG GCGGTAAAAC AACGACTACT CGAGTCTTTT CTGTCAATGG TACGACTTAT GATCCTAAAG ACGGTGGAAT TGTTGATTGG GGATCCAACA ATATGGATGC TAACTTGCAA GCTGTTGCTG AGATATGTTC AATTTGTAAT GATGCTGGGG TGTTCTATGA AGGAAAGTTG TTTAGAGCAA CGGGTTTGCC TACAGAAGCT GCCTTGAAAG TTCTTGTTGA GAAGATGGGT ATTCCAGAGA AGAAGAACGG TGAGAATATC GAGGAAGTTG CAAACTTTTC AGACAATGGT AGCTCAGTGA AGCTAGCTTG TTGCGATTGG TGGAACAAAA GATCGAAAAA GGTAGCGACA CTCGAGTTTG ATCGCGTCCG TAAGTCCATG AGTGTTATTG TGCGCGAACC AAATGGAGAA AACCGGCTTC TCGTTAAGGG TGCAGCTGAG AGTATACTTG AGAGAAGTTC TTTTGCACAA CTCGCTGATG GATCTCTTGT CCCTTTAGAT GATTCTAGCA GAGAAGTAAT CCTCAAGAAA CATTCTGAAA TGACTTCAAA GGGATTAAGA TGTTTAGGAT TGGCTTACAA AGACGAATTA GGAGAGTTTT CGGATTACTC TTCTGAAGAA CATCCTTCAC ACAAGAAGCT TTTAGACCCT TCTAGCTATT CGAACATCGA AACAAATCTA ATCTTCGTTG GAGTTGTTGG TCTAAGAGAT CCTCCGCGTG AAGAAGTTGG AAGAGCAATT GAAGATTGCA GAGACGCTGG GATTAGAGTA ATGGTGATAA CTGGGGATAA CAAATCAACA GCTGAAGCTA TATGTTGTGA GATTAGATTG TTTTCAGAGA ATGAAGATCT TTCGCAGAGT AGCTTCACCG GTAAAGAGTT TATGTCTTTT CCGGCTTCAC GGAGATCCGA AATTCTGTCA AAATCTGGAG GGAAAGTGTT CTCTCGAGCT GAGGCAAGGC ATAAGCAAGA AATCGTTAGG ATGCTTAAAG AAATGGGAGA AATCGTTGCG ATGACAGGTG ATGGTGTGAA TGATGCTCCT GCGTTGAAAC TCGCTGACAT TGGTATTGCC ATGGGAATCA CTGGAACTGA GGTTGCGAAA GAAGCTTCGG ATATGGTTCT TGCAGATGAT AATTTCAGTA CTATCGTCTC GGCTGTAGCA GAAGGTCGTT CCATTTACAA CAATATGAAA GCTTTTATCA GGTATATGAT ATCATCAAAC GTTGGAGAAG TAATCTCCAT CTTCTTAACC GCGGCATTGG GGATACCGGA ATGTATGATA CCTGTTCAGC TTCTTTGGGT TAATCTGGTA ACTGATGGTC CTCCAGCTAC AGCGCTAGGC TTCAATCCAG CTGATATTGA TATTATGAAG AAACCACCCC GCAAAAGCGA TGATTGTCTC ATCGATTCAT GGGTTCTTAT TCGATATCTA GTGATTGGTT CTTATGTTGG AGTTGCAACT GTGGGAATAT TTGTCTTGTG GTACACACAA GCTTCTTTCC TCGGGATTAG CCTAATCTCA GATGGACACA CATTGGTCAG CTTCAATCAG CTTCAGAACT GGTCAGAGTG TTCTTCGTGG GGAACGAACT TCACTGCGAC TCCTTACACA ATCGCAGGTG GTCTTAAGAC CATCGCGTTT GAGAACAATC CTTGCGATTA CTTCACTCTT GGGAAAGTCA AGCCAATGAC ATTATCGCTC TCTGTTCTTG TGGCTATTGA GATGTTTAAC TCGCTGAACG CGTTGTCCGA AGACAACAGT CTCTTAACGA TGCCACCATG GAGAAACCCT TGGCTACTAG TGGCCATGAC TGTCTCCTTG GGGCTTCACT GCGTGATCCT CTACGTTCCT TTCTTAGCTA ATGTGTTTGG GATTGTGCCT TTGAGTTTCA GGGAATGGTT TGTGGTTATT CTTGTTTCCT TCCCTGTGAT TCTAATCGAT GAAGCTCTCA AGTTCATTGG GAGATGCAGA AGGACAAGAA TGAAGAAGAA GATCAAGACA ATGTAAAAGT CTGATCAACA C |
| Length | 3241 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 23056193.. 23059779 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G00900.1 |
| Description | ER-type Ca2+-ATPase 2 |
| TAIR curator summary | Type IIA (SERCA-type) Ca2+ ATPase, catalyzes the efflux of calcium from the cytoplasm. |
| Alias | [ATECA2][ECA2][ARABIDOPSIS THALIANA ER-TYPE CA2+-ATPASE 2][ER-type Ca2+-ATPase 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.54983 |
Ahg471824 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain |
| 10.9545 |
Ahg923423 | Family of unknown function (DUF566) |
| 11.9164 |
Ahg482225 | proline-rich family protein |
| 13.5647 |
Ahg478044 | SMAD/FHA domain-containing protein |
| 15.4596 |
Ahg486731 | Protein phosphatase 2C family protein |
| 15.4919 |
Ahg908702 | FORMS APLOID AND BINUCLEATE CELLS 1C |
| 21.1187 |
Ahg920676 | homology to ABI2 |
| 23.9583 |
Ahg358061 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 24.98 |
Ahg925609 | IBR domain-containing protein |
| 27.2397 |
Ahg492104 | Galactosyltransferase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|