Detail



ID : Ahg923423

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|923423|scaffold_104704.1
Sequence
AACAGTTTTT CCCGACGAGA ATGGTGGCTG CAGCGATTTC AACCACTGAC CCAAGAAACC CACCTCGAGA TCGACAAGAT AAACCTCAAT CCTTAACCAA CAATGGCGGA CAAAGAAGAC CCAGAGGCAA ACAAGTTCCT TCTCGCTACT TATCTCCTTC TCCTTCTCAC TCTGTCTCTT CCAACACCAC TACCACTACC ACCACTACCA CGTCTTCTTC CTCCTCTTCT TCTTCCTCTG CAATACTCAG AACTAGTAAA CGATACCCAT CTCCTTCGCC TTTACTCTCT CGCTCCACGA CGAATTCCGC TTCTAATTCC ATCAAAACGC CTTCTTTGTT ACCTAAACGG TCCCAATCAG TGGACCGTCG TCGACCCTCG GCGGTTCCGG TCACTGTAGG CAGTGAAATG TCGGCGGCTA CGAAGATGCT TATCACTTCC ACTAGGAGTT TGTCTGTTTC GTTTCAAGGT GAAGCCTTTT CTCTTCCGAT TAGTAAAAAG AAAGAGGCTA CTACTACGCC GGTTTCTCAC CGGAAATCTA CTCCGGAGCG ACGGAGATCG ACGCCGGTTC GAGATCAGAG AGAGAACTCT AAGCCTGTGG ATCAGCAACG GTGGCCTGGA GCTTCACGGA GGGGGAATTC CGAATCTGTT GTGCCGAATT CGCTTTCTAG AAGCTTAGAT TGTGGTAGTG ATAGAGGAAA GCTTGGATCT GGGTTTGTTG GGAGGTCAAT GTTGCATAAT TCTATGATTG ATGAGAGTCC TAGGGTTTCT GTTAATGGGA GATTGAGTTT AGATTTGGGA GGTAGGGATG AATATTTGGA AATTGGAGAT GAGAGCCAGA GAAGACCAAA TAATGGTTTG ACGTCTAGTG TTTCCTGTGA TTTCACTGCT TCTGATACTG ATAGTGTTTC TTCTGGTAGC ACTAGTGGTG TTCAGGAATG TGGCTCTGGT GTTAATGGGG AAATCTCTAA ATCAAAGAGC TTGCCTCGTA ATATTATGGC TTCTGCTAGG TTTTGGCAAG AGACTAATAG CCGGTTAAGG CGGTTGCAGG ATCCAGGTTC GCCTTTATCC TCTAGCCCGG GTTTGAAAAC CAGTAGTGTA TCTTCAAAGT TTGGTCTTTC GAAACGGTTT TCTAGCGATG CTGTTCCTTT ATCATCTCCT CGTGGTATGG CTTCTCCTGT AAGAGGTTCT GCTATTCGCT CTGCTTCACC AAGTAAGCTT TGGGCGACAA CTACCTCATC TCCAGCTAGA GCGCTTTCGA GTCCTTCTCG AGTGAGAAAT GGAGTTTCTG ATCAAATGAA CGCTTATAAC CGCAACAATA CGCCTTCAAT TCTTAGTTTC TCTGCTGATA TTAGGAGAGG TAAAATTGGG GAGGATCGTG TTATGGATGC ACATTTGTTG AGGCTTCTAT ATAACCGTTA CCTGCAGTGG CGTTTTGTCA ATGCGAGGGC AGATTCTACT GTTATGGTGC AAAGATTGAA CGCAGAGAAA AACCTGTGGA ATGCATGGGT ATCAATCTCG GAATTGCGGC ACAGTGTCAC TTTAAAACGA ATCAAGTTGC TTTTGCTAAG GCAGAAATTG AAACTGGCTT CTATTTTGAG GGGACAGATG GGTTTTCTAG AAGAATGGTC TCTTCTGGAT AGAGATCATT CAAGTTCTCT GTCTGGAGCA ACCGAATCCT TGAAAGCCAG TACGCTTCGT CTACCAATAG TTGGAAAAAC CGTGGTTGAT ATCCAAGACC TCAAGCATGC TGTTAGTTCA GCCGTCGATG TAATGCAAGC TATGTCATCT TCCATATTCT CACTGACGTT GAAGGTGGAT GAGATGAATT CTGTAATGGT CGAAACCGTG AATGTAACTG CTAAGGAAAA GGTTTTGCTT GAAAGATGTC AAGGTTGCTT ATCAAGCGTA GCAGCTATGC AGGTTACTGA TTGTAGCATG AAAACGCATA TAATACAACT AAGTCGGATA CCAATCACAA GCAGCTTGAC TTCACAACTG TAGAAAAACT GATCTTCCTC AAG 
Length2023
Protein Sequence
Protein Residue
Map Locationscaffold_1: 24766701.. 24770053
Download Sequence
A.thaliana
AGI-codeAT1G49890.1
DescriptionFamily of unknown function (DUF566)
TAIR curator summary
Alias[QWRF2][QWRF domain containing 2]
Gene coexpression
MR
MR Locus Description
4.24264 Ahg495386 DNAJ heat shock N-terminal domain-containing protein
4.89898 Ahg489258 Protein of unknown function (DUF819)
6 Ahg489601 DNAJ heat shock N-terminal domain-containing protein
9.48683 Ahg485234 Sterile alpha motif (SAM) domain-containing protein
10.9545 Ahg490475 ER-type Ca2+-ATPase 2
18 Ahg925208 binding
18.5203 Ahg320306 Actin-binding FH2 (Formin Homology) protein
20.8567 Ahg475131 Ankyrin repeat family protein
22.383 Ahg482933 pseudouridine synthase family protein
23.2379 Ahg480858 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression