Detail



ID : Ahg491381

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|491381|fgenesh2_kg.7__814__AT4G33070.1
Sequence
TTTTTCAATT TCTCTGTTAG TGAACTCAAA TCTTCCAATT TCTATGGACA CCAAAATCGG ATCGATCGAT TATTGCAAGC CGACGAATGG CGACGTCGGT AGTCCACCAA ACGGCGCCGT CTCAACAATC CACAACTCTG TTCCTTCCTC CGCTATCACC GTCAACTCAT GCGATTCGAC TATCGGTCGT TACATAGCTC GCCGTCTCGT CCAAGCCGGC GTGACCGATA TCTTCTCTGT TCCCGGCGAT TTCAACCTCA CTTTGCTTGA TCACCTCATG GCTGAGCCGG AGCTGAATCT GATCGGCTGT TGTAACGAGC TTAACGCCGG TTACGCTGCC GACGGTTACG CTAGATCTCG TGGAGTCGGC GCTTGCGTTG TGACCTTCAC CGTTGGTGGA CTCAGCGTTT TGAACGCGAT CGCTGGTGCT TACAGCGAGA ATCTTCCGCT TATCTGTATC GTCGGAGGTC CTAACTCTAA CGATTATGGC ACCAACCGGA TTCTTCATCA CACCATCGGA TTACCTGATT TTAGCCAAGA GCTTAGGTGC TTCCAAACGG TGACTTGTTA TCAGGCGGTG GTGAACAATT TGGAGGATGC TCATGAACAG ATTGATATAG CGATATCAAC AGCTTTGAAA GAGAGCAAGC CTGTGTATAT AAGCATAAGC TGTAACTTAG CAGCGATTCC TCATCATACA TTTAGCCGTG CTCCAGTCCC TTTTTCTCTA GCGCCTAGAT TGAGCAACAA GATGGGTCTA GAAGCTGCGG TGGAAGCAAC TTTGGAGTTT CTGAATAAGG CTGTGAAGCC AGTTATGGTT GGTGGTCCTA AGTTGCGTGT GGCTAAAGCT TGTGATCTCT TTGTTGAGCT AGCTGATGCT TCTGGCTATG CTAAGCCGGC GATGCCTTCT GCGAAAGGCC TTGTACCAGA GCACCATCCT CATTTCATTG GCACTTATTG GGGAGCAGTG AGCACTCCTT TTTGCTCTGA GATTGTGGAA TCTGCGGATG CTTACATTTT TGCAGGTCCA ATCTTCAACG ACTATAGCTC TGTGGGTTAC TCGCTTCTCC TCAAGAAAGA AAAAGCCATC GTCGTGCATC CTGATCGTGT CACTGTGGCT AATGGTCCAA CGTTTGGATG GGTTCAGATG AGCGATTTCT TCAGGGAATT GGCTAAGAGG GTGAAGCGTA ATGAGACTGC TTATGAGAAC TACCATAGGA TCTTTGTTCC TGAAGGTAAG CCATTGAAGT GCGAATCAAA AGAGCCATTA AGAGTTAATA CAATGTTCCA ACACATTCAG AAGATGCTCT CTAGTGAAAC CGCTGTGATT GCTGAAACCG GTGATTCTTG GTTCAATTGC CAGAAACTAA AGTTGCCAAG AGGCTGTGGA TACGAGTTTC AGATGCAGTA TGGATCGATT GGGTGGTCTG TTGGTGCAAC TCTAGGATAC GCACAGGCAT CACCAGAGAA GCGAGTGTTG GCATTCATCG GTGACGGGAG TTTCCAAGTG ACGGCTCAGG ACATATCAAC AATGCTGCGT AATCGACAGA AGACGATCAT CTTCTTGATT AACAATGGTG GCTACACCAT TGAAGTAGAG ATTCATGATG GTCCTTATAA CGTGATTAAG AACTGGAACT ACACTGGTCT CGTTGACGCC ATTCATAACG GTGAAGGCAA TTGCTGGACT ACAAAGGTGA GATACGAGGA GGAGTTAGTG GAGGCGATCA AGACAGCAAC AATGGAGAAG AAAGATTGTC TATGTTTCAT AGAAGTGATT CTTCATAAGG ATGATACGAG CAAAGAGTTG CTTGAGTGGG GCTCACGCGT ATCTGCTGCT AATAGCCGTC CTCCCAATCC TCAGTAGAAG AAGCAACACA GAGTCTTCAC TGCTTCTTAC CAATTCAGTG ACATCGTGTT TGGAACTTAT TAGTATCTCT TTCCAATTAG TACGCTTTAT TGTGGAATAA AGTAAATTTC CTTTTCCAGT TTCATTAATT GAATAAATCC AAATGGTTCA ATTTAAACAT AAAATATCAA TATCATATGA TTTTTTTTG 
Length2059
Protein Sequence
Protein Residue
Map Locationscaffold_7: 3214004.. 3216459
Download Sequence
A.thaliana
AGI-codeAT4G33070.1
DescriptionThiamine pyrophosphate dependent pyruvate decarboxylase family protein
TAIR curator summary
Alias[AtPDC1][PDC1][pyruvate decarboxylase 1]
Gene coexpression
MR
MR Locus Description
3 Ahg949566
9.94987 Ahg321332 Basic-leucine zipper (bZIP) transcription factor family protein
12.4097 Ahg920906
12.49 Ahg477490 LOB domain-containing protein 41
16.4924 Ahg325294 Late Embryogenesis Abundant 4-5
17.0587 Ahg941255
17.7764 Ahg927111 alcohol dehydrogenase 1
18.303 Ahg922994 related to AP2 1
18.9737 Ahg492273 homolog of DNA mismatch repair protein MSH3
26.3818 Ahg315131 beta vacuolar processing enzyme
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression