Detail



ID : Ahg491573

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|491573|fgenesh2_kg.7__1006__AT4G31670.1
Sequence
AGATCGATGA TTTCAAGAAG CGAATTAGAT GCATGAGGTT GGTTTTCCGT TGGATCTCTC TGTCTTCACT CGCCTCATAG CGACTCTATT CTTCCTCGCC GTTGGTGTTT TTTACTTTCT CAAAAACACC GCCGCTAAGT ACTTCGACAT CGGAGCCGCC GCCGCCGGAG GTTTCGACAG GGACTTCATG GCGGTTGATA CTGAGGATTG CTCTGTCTGT GGGAATTTTT CCACCAAGAA ATGCTCCCGC TGCAAATCCG TTAGATACTG CTCAGCAGAG TGCCAAAGGT CAGACTGGAG CTCGGGTCAT CAAAGAAAGT GCAAGGATTA TGGGATTACT ACATTAACAC CATCTGCAAA GAATGGCTTA AGGTTCAGAG CTTCTCCGTT CGGGGATAGT TCTGCTTCTA ATATTGCACT GATTTCCGAA CGGGCCCAAA ACAAGAGTAG TCTCAAGCCA AGAGAAGTTC TTTTTCCATA TGAAGAATTT GTTCACTATT TTAACTGGGA CAATCCAGAA TTGGCTCCCT GTGGGCTCAT GAATTGTGGA AATAGTTGTT TCGCCAATGT GATTCTACAA TGCCTTTCCT GGACACGTCC TCTTGTTGCA TATCTGCTGG AGAAAGGCCA CAAGAGAGAA TGTATGCACA ACGATTGGTG CTTCTTCTGT GAATTTCAAA CCCATGTTGA GAGAGCGAGT CAAAGTCGGT TCCCTTTTTC ACCAATGAAC ATTATTTCAC GGTTAACTAA TATTGGTGGA ACTCTTGGGT ATGGAAGACA GGAGGATGCT CATGAGTTCA TGAGGTATGC GATTGATATG ATGCAGTCTG TTTGCCTTGA AGAATTCGGT GGAGAAAAAA TAGTGCCTCC TCGTTCTCAA GAAACAACAC TTATTCAGTA TATATTTGGA GGTCTTCTCC AATCACAGGT TCAGTGTACT GTTTGCAATC ATGTTTCTGA CCAATATGAA AATATGATGG ATCTAATCGT TGAGATGCAT GGGGATGCGG TGTCTTTGGA GGAATGTCTT GATCAATTTA CAGCCGAAGA GTGGCTTCAT GGAGATAACA TGTACAAATG TGATAGGTGT AGTGACTATG TAAAGGCATG TAAGCGTCTT ACGATTTGGC GCGCTCCAAA TATTCTTACG ATTGCCTTAA AAAGATATCA GGGAGGAAGA TACGGAAAAC TGAACAAAAG AATAAGTTTT CCTGAGACAT TGGATCTTAA TCCTTACATG AGTGAAGGCG GAGAAGGATC AGATGTATAT AAACTCTATG CAGTGATTGT CCATTTAGAT ATGCTGAATG CATCATTCTT CGGCCATTAC ATATGCTACA TTAAGGATTT TTGCGGAAAC TGGTATAGAA TAGATGATTC CGAGATAGAA AGTGTTGAAT TAGAAGATGT TCTTTCTCAA AGAGCTTATA TGCTCCTCTA CAGCAGGATT CAAGCTCGGT CGTCATCATC ATGTCTTAGA TCAGAAGTTC AAGACGAGAA GAAAACAGAA TCTTGCGTAA AAGAGTTAGT TGAGAGTTCA ATGGTAGGAG CTATTGAAAG CAGAAGCAGC ACCCATGTGA CCATTGAAGA CCCTGAACGT GAGCAATCAC CATCACCATC ATCATCATCA TCATCATCAG TACTGACCTC TGAATGCTGT AGTGAGGTTG AAAGGGTTGA TACATTGGAT TCCGAGTCAA ACCCTTCAAC TGATGACTCT GCAACAGATC ATCAAGAGGA TGCAGCAAAT GGGAACAGAG ATCCAGAGGT AAAATATCAG GCTGTCGATT CTTGTTCAGA CCCTACAACT TCAACTCCAC TGGTCTGTAC AAAATCCAAA CCTCCGGTGA GAGATATGGA CACCAAGATG ATCGACGCGC AATGATGTGG TATGTTAAAA CATTTGAAAA TCAACAGAGC GTTTAGCTTA CAAAGTTACA ATAGTGATGC AGATACTATT ACACAATGAC TTATATGGTA CAAAGGGTGA TTATACATAG AATTTAAATG TTC 
Length2013
Protein Sequence
Protein Residue
Map Locationscaffold_7: 3975451.. 3979105
Download Sequence
A.thaliana
AGI-codeAT4G31670.1
Descriptionubiquitin-specific protease 18
TAIR curator summary
Alias[UBP18][ubiquitin-specific protease 18]
Gene coexpression
MR
MR Locus Description
5.74456 Ahg478339
15.2971 Ahg893015 RNA-binding (RRM/RBD/RNP motifs) family protein
18.1659 Ahg925271 F-box family protein
18.7617 Ahg948341 Pentatricopeptide repeat (PPR) superfamily protein
19.8242 Ahg900811 GCN5L1 family protein
34.6699 Ahg494442 nodulin MtN21 /EamA-like transporter family protein
39.4335 Ahg494088 Thioredoxin superfamily protein
47.0319 Ahg473098 Uncharacterized conserved protein (DUF2215)
55.6866 Ahg495453 Seven transmembrane MLO family protein
57.1489 Ahg909813 ferric reduction oxidase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression