Detail


ID : Ahg491703

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|491703|fgenesh2_kg.7__1136__AT4G30480.2
Sequence
CATCTTGGAC CTTCTTCTTC TCTAGCTTGG ATTCTGAGAT TTCTTAGGAA AGCTAGATCG ACGATCGAAT AAGTCTCGCG TTGAAATCTC TCTTTGTGCA AGCAAACTCT CGAAGAACCC TAGATTGAAG ATGGTACTGA TCGAATCAAG TGAGGGTGAG GATGAGATCC TCATCAAAAA CGAACCAAAG CCATCGTCTT CATCCTCACC GCAACCCATG GAGACGAAAC AAGTCGACGG AGATGATTCC GACGGTTTCG AGACTGCCAG CGAACGTGAA GTTAGCGATG AAGAAGGAGA GGAAGATGGT ACCAAAAACG ACGCCGTCAC GAGTCAGGAG GAACCACAAC ACTCGGAGAC GAAGGGAGAG CATGTTGAGC TAATGAGTGA AGGAGAAGTC ATAGTCGACG ACGGATCAAT CCAGGAGAAA GCTATGGCAG AAGCAAATGA GGCTAAAGTG GAAGGAAATA AACTGTTCGT TAATGGCCTT TATGAAGAAG CATTGTCAAA GTATGCTTGT GCTTTAGAGC TTGTTCAGGA GTTTCCTGAG TCTATAGAGC TTCGATCCAT ATGCCATTTA AACAGAGGTG TATGTTTCCT CAAATTGGGT AAATGTGAAG AAACGATCAA GGAATGCACA AAAGCCTTAG AGCTAAATCC TACCTACACT AAGGCCTTGG TTCGAAGGGC AGAAGCACAC GAGAAACTTG AACATTTCGA AGATGCTGTC ACGGACCTGA AGAAGATCTT AGAACTTGAT CCTTCAAATG ATCAAGCTAA GAAAGGGATT CGACGTCTTG AACCTCTTGC TGCTGAGAAG CGAGAAAAGA TGAAAGAAGA GGCTATAACT AAGCTGAAGG AGATGGGAAA CTCGATTTTG GGTCGATTTG GGATGAGTGT GGACAACTTC AAGGCTGTTA AAGATCCCAA CACTGGCTCC TACTCTCTTT CTTTCCAAAA CTAGTATAAT ATCGTAGTGG TCTTGATGTA TTGCTTCTAC CACTTAATGT TTAGCAACAA TATGGTTAGT ATTGCAATGT GTTATTGTTC CTGATGCATT CATGAAAAGA TGCAATTCTT TTGGATTTAA TATAGCAGTA AATAAAAAAT TCAATGTTAC AACAATGG
Length1128
Protein Sequence
Protein Residue
Map Locationscaffold_7: 4457269.. 4460893
Download Sequence
A.thaliana
AGI-codeAT4G30480.2
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias[AtTPR1][TPR1][tetratricopeptide repeat 1]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg476988 Protein phosphatase 2C family protein
14.4914 Ahg915302
17.5499 Ahg487496
18 Ahg947584 homolog of Xeroderma pigmentosum complementation group B 2
20.9045 Ahg328472 copper ion binding
37.1483 Ahg486804 NPL4-like protein 1
45.4973 Ahg494291 Syntaxin/t-SNARE family protein
48.5592 Ahg479439 Vacuolar import/degradation, Vid27-related protein
48.7442 Ahg480586 F-box family protein with a domain of unknown function (DUF295)
50.448 Ahg934940 phosphatidylinositol- 4-phosphate 5-kinase 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression