Detail



ID : Ahg491722

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|491722|fgenesh2_kg.7__1155__AT4G30280.1
Sequence
ATCGACAATA CATTTGAGAT ATCAATACTC CTCCACAAAT CTACCAAAAT GAAGCTTTCT TGTGGTACAA GTTTTGCGTT CTTGATTTTG TTTCTTTTTG CGGCACAATC TGTGCATGTC AATGCGGGTA GCTTCCACAA AGACGTTCAG ATACATTGGG GTGATGGCCG CGGAAAGATT CGCGACAGAG ATGGAAAGCT TCTTTCTCTC TCGCTCGACA AATCCTCTGG ATCCGGTTTT CAGTCTAACC AGGAGTTTCT CTATGGCAAA GCTGAGGTTC AAATGAAACT TGTCTCTGGT AACTCAGCTG GAACAGTGAC AACATTTTAT CTTAAATCTC CGGGAACTAC GTGGGATGAG ATTGATTTCG AGTTCTTGGG AAATCTTAGT GGTCATCCAT ATACTCTCCA TACTAATGTT TACACAAAAG GCTCTGGAGA TAAAGAACAA CAATTTCATC TATGGTTCGA CCCAACCGTT AACTTTCACA CTTATTGCAT CACATGGAAT CCCCAAAGGA TTATTTTTAC AGTTGATGGA ATTCCCATTA GAGAGTTCAA GAATTCCGAG TCAATTGGAG TTCCGTTCCC AACGAAGCAA CCAATGAGGC TCTACGCGAG TCTATGGGAA GCCGAGCATT GGGCTACAAG GGGAGGATTA GAGAAAACAG ATTGGTCAAA GGCTCCTTTT ACCGCTTTCT ACAGAAACTA CAATGTTGAT GGGTGTGTAT GGGCTAATGG AAAATCATCT TGTCCCACGA ATTCTCCATG GTTCACTCAA CAACTCGATT CAAACGGCCA GACAAGAATG AAAGGAGTAC AGAGTAAGTA CATGGTCTAC AACTATTGCA CCGATAAAAA AAGGTTTCCT CGAGGTGTTC CAGCAGAGTG CAGTTAAATT GTTGATTCTT TGATTCGTGA ATAAGTTACA TAGCATTTAT TTCTATCATT CATTTGTTGC TTATATATAT GGTGTTTGTG TAAGATGTTC TTAAGAAGTA ATAAAAAT 
Length1008
Protein Sequence
Protein Residue
Map Locationscaffold_7: 4542208.. 4543442
Download Sequence
A.thaliana
AGI-codeAT4G30280.1
Descriptionxyloglucan endotransglucosylase/hydrolase 18
TAIR curator summaryEncodes a xyloglucan endotransglucosylase/hydrolase with only only the endotransglucosylase (XET; EC 2.4.1.207) activity towards xyloglucan and non-detectable endohydrolytic (XEH; EC 3.2.1.151) activity. Expressed in the mature or basal regions of both the main and lateral roots, but not in the tip of these roots where cell division occurs.
Alias[ATXTH18][XTH18][XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 18][xyloglucan endotransglucosylase/hydrolase 18]
Gene coexpression
MR
MR Locus Description
4.47214 Ahg475586 xyloglucan endotransglucosylase/hydrolase 17
7.48331 Ahg921306 Integrase-type DNA-binding superfamily protein
9.59166 Ahg949754 Integrase-type DNA-binding superfamily protein
11.0905 Ahg922473
38.0526 Ahg481107 arabinogalactan protein 2
41.2916 Ahg494031 Peroxidase superfamily protein
44.2719 Ahg354208 xyloglucan endotransglycosylase 6
49.2443 Ahg481588 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
49.6387 Ahg353717 Calmodulin-binding protein
58.5833 Ahg486595 BON association protein 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression