Detail



ID : Ahg921306

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|921306|scaffold_102587.1
Sequence
TCGCATCGAT CATACAAAAA ATGGATTACA GAGACGCCGG TGAAACTCAG TCAAAGTACA AAGGAATCCG TCGTCGGAAA TGGGGCAAAT GGGTATCGGA GATTAGAGTT CCGGGAACTC GTGACCGTCT CTGGTTAGGT TCATTCTCAA CCGCCGAAGG CGCCGCCGTA GCACACGACG TTGCTTTCTT CTGTTTACAC CAACCTGATT CGTTAGAATC TCTCAATTTT CCTCATTTGC TTAATCCTTC AATCGTTTCC AAATCTTCGC CGAGGTCTAT CCAGCAAGCT GCTTCTAATG CCGGAATGGC CATCGACGCC GGGATCGTTC ACAGTAACGG TGGTTTTGTG TCGGGAAATT CTGGGTGTGG TGATACGACG ACGTATTGTG TGAATGGAGC TGTGGAAATG GAGCCGTTGA ATATTTCAGT GTATGATTAT CTGGACGGTC ACGATCACGT TTGATCTTGT TTTGAGTAAG ATTA 
Length484
Protein Sequence
Protein Residue
Map Locationscaffold_1: 9587891.. 9588371
Download Sequence
A.thaliana
AGI-codeAT1G22810.1
DescriptionIntegrase-type DNA-binding superfamily protein
TAIR curator summaryencodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.
Alias
Gene coexpression
MR
MR Locus Description
3 Ahg931626 RPM1-interacting protein 4 (RIN4) family protein
6.55744 Ahg476823 calmodulin-like 38
7.07107 Ahg922473
7.34847 Ahg949754 Integrase-type DNA-binding superfamily protein
7.48331 Ahg491722 xyloglucan endotransglucosylase/hydrolase 18
10.247 Ahg475045 Integrase-type DNA-binding superfamily protein
10.247 Ahg940278 suppressor of phytochrome b 5
19.1311 Ahg927573 Calcium-binding EF-hand family protein
22.9783 Ahg471409 Integrase-type DNA-binding superfamily protein
23.2379 Ahg909901 gibberellin 2-oxidase 6
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression