| Annotation |
|---|
| Description | jgi|Araly1|491730|fgenesh2_kg.7__1163__AT4G30200.2 |
| Sequence |
TCTCTCTCTC TCTCTCTCTC TCTCTCTCTT CTCTGGTGTA TCCGTTCTCC GGGAAGTTCT CCGAAGAGGG AGAGAGAAAA AAAACCGTTC GATTCAATCT CTTGACGAAT TTTTCTTAAG CTTTCCTTAT TGGGGATTTG AAGATTCTGA GTGGTTGTTA TGATGATAAT GTGGGTTTGA TTAGTTCTTG ACAGTTTCTC TACGCTAATG GATTCTTCTC TGGATGGAGC TGCAGGTGAC TCATCGAAAT GCGGTGAAAT GAGTGTTGAT GAGAAGAGAC AGCTTGTTTA TGAACTTTCG AAGCAATCAC ATCTAGCTTC TGAGGTCTTG CAGGCATGGA GCCGGCAAGA GATTCTACAG ATCTTATGCG CAGAAATGGG AAAAGAAAGG AAGTATACTG GCTTGACCAA AGTCAAGATC ATCGAGACCC TTTTGAAAAT TGTATCCGAG AAAAACTCTG GAGAGAATGA GGGGAAGAAG AGAGATTCTG ATTGTTTGCC TATTCAGAGA AACACAAAGA GACAAAGGAA GGTCGATAAT CCTTCTCGGT ATGTGCTTCC AGCAAGCAAC AACGTAACAA GCAACAATGC CTCAGGGAGC TGCAGCTCGG TTAATACTAA AGGTGAGAGT ACTATCTACT GCAAGAACTT GGCTTGCCGT GCTGTAATGA GACAGGAAGA CTCATTTTGC AGAAGGTGTT CCTGTTGCAT CTGTCGTAAG TATGATGATA ACAAAGATCC TAGTCTCTGG TTAACATGTA GCTCAGATCC TCCATTCGAG GGTGAGTCTT GCGGATTCTC GTGTCATCTT GAATGTGCTT TCAAGACTGA AAAATCCGGT CTTGGAAAAG ACAAGCAAAG TGAGGGATGC TGCTTCTATT GTGTCTCTTG CGGTAAAGCA AACAGTTTGC TTGAATGTTG GAAGAAGCAA TTGACGATTG CTAAAGAAAC CAGAAGGGTA GATGTGCTTT GTTACCGTCT TTTCTTAGTT CAGAAACTAT TGAAGAGCTC AACTAAATAC CGAGATCTGT GTATGGTTGT GGATGAAGCT GTCAAGAGTC TTGAAGCTGA TGTAGGTCCT CTCACTGGTC TCCCTATGAA AATGGGTAGA GGAATTGTAA ACAGACTTCA TTCGGGACCC GATGTGCAGA AACTTTGCTC TTCTGCTCTT GAATCTCTTG AAACTCTAGC AACTGCACCT CCGGATGTTG CTGCATTACC TTCATCTCGC AGCTCCAAGA TTCAGCAAGA TTGTTCTTAT GTATTGAGCA ATGAGATATC TGCAGATACA GCAACCACAG GATCAACCAA GATCAGGTTC GAGGATGTTA ACGCGACTTC ACTCACAGTG GTTCTAGCCT CTAATGAAAT TCCCTCACCT CCAAACATCG TCCACTACAG TATTTGGCAT CGCAAGGTAC CAGAAAAAGA TTACCCGGAG AAATCGACTT GCACATTGTT TACTCCAAAC ACAAGATTTG TTGTCTCTGG ATTAGCTCCA GCTTCCGAGT ATTGCTTCAA AGTTGTGTCC TATAGTGGAA CCAGAGAAAT GGGCGTCGAT GAAATCAATG TTTTGACACG TAGCGCTGAA GAAGGAGCGA ATTGCTCTTC GGGAGTCGAA AGAAGCGAAA GCCCTCTCAC AAATTGCAGC ACATTGTCTT CTAATCCTTC TTCTGTGGAA GCTGAGTCCA ACAACGATTA CATTGTCCCA AAGAAGCCAT CAAAGAACGA CAACAACAAT TCTCCTTCAG TTGATGAAAG TGCTGCTAAA AGGGCGAAGA GGACAACCGA ATCAGACATT GTACAGATAG AGAATAACGT TGAACAGATT GTGTTGTTGG AGGAGGAAGA ACAAGAAGCT GTTCTCGATA AGAACGGATC AGGATCCGGA TCCGGATCTG AAACTCCAGC CCTGGTTACT ACGAAAAATC TTGCTAGTAA TCGAAACAAT TCAGATGCGA GTTTGCCAAT TACTCCCTTC AGGTCAGATG AAATCAAGAA CCGTCAAGCT AGAATCGAAA AATCGGTTAA AGACAACTGT AACAACGGTG ATCATTCAGC GAATGGAGGA ACAGAGAGTG GACTAGAGCA TTGTGTGAAG ATCATAAGAC AGCTCGAGTG TTCAGGACAT ATCGACAAGA ATTTCAGACA GAAGTTTCTG ACTTGGTATA GCTTAAGAGC AACGTCACAA GAGATTAGAG TTGTGAAGAT ATTCATTGAT ACGTTTATTG ATGATCCCAT GGCTTTAGCT GAGCAGCTCA TAGATACTTT CGACGACCGC GTTTCGATAA AGCGTTCTGC GATTGGTGGT AGCGGTGCGT CTGCGGTTGT TCCATCTGGA TTCTGTATGA AGTTGTGGCA TTAGAGATGG GGAGATTGCT CTGTTTTTTT TTCAAGTCAT TTTCAAAACG TTATTCTAAT TATTGGGAAA TTTGCATTAT TGGAACATTT CCATGCAAGA ACAGTAGTAC TGTTGCTATC GAATAGTTTG TTTTGTCGGA TTATTTATTT TATTTTATGG ATTTGATTCC ATTTATAATT TAGTACTAGA CTGAATTATT ATAATTTCGT TGAC |
| Length | 2574 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 4576969.. 4579464 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G30200.2 |
| Description | vernalization5/VIN3-like |
| TAIR curator summary | Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus. |
| Alias | [VEL1][VIL2][vernalization5/VIN3-like 1][VIN3-Like 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.64575 |
Ahg479043 | WUS-interacting protein 2 |
| 6.32456 |
Ahg477551 | cellulose synthase-like D3 |
| 6.63325 |
Ahg485799 | Protein kinase protein with tetratricopeptide repeat domain |
| 8.94427 |
Ahg923799 | Rubredoxin-like superfamily protein |
| 11.4891 |
Ahg934119 | transcription activators |
| 12 |
Ahg470941 | Presenilin-1 |
| 13.4164 |
Ahg492802 | FAD-binding Berberine family protein |
| 15.5885 |
Ahg491705 | NAD(P)-binding Rossmann-fold superfamily protein |
| 16.4317 |
Ahg493199 | acyl-CoA oxidase 1 |
| 17.6068 |
Ahg476412 | translocase inner membrane subunit 23-2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|