Detail



ID : Ahg492802

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492802|fgenesh2_kg.7__2235__AT4G20840.1
Sequence
ATGATTGCAA CACAAACATT TGTCTCTGTC CTTTTCTTTG TCCTCTTCCT TATATCTCTC CCTTTCTCCA CATTCGCTGC ACCTCCGTCG TCGGACTCTA TCTACGAATC CTTTGTTCAA TGTTTCTCTG ACAAGACGAA ATCTCCACAA ACCCAAATCA CTGACAATGT CTTCTCTCAG ACAAACCCTT CTTTCTCCTC CGTCCTTCGT GCTTACATTC GAAATGGGAG GTTCAACACT TCATCTACTC CAAAACCCAC TATCATCGTC ACTCCTCGCT CCGAGAGCCA CGTCAGCGCC GCCGTCACTT GCTCAAAAAC ACTAAATTTC CTCCTCAAAA TCCGAAGTGG TGGCCATGAT TACGAAGGTC TCTCTTACAT CTCCGATAAA CCCTTTTTTA TACTCGACAT GTCGAATCTC CGTGATGTCT CTGTCGATAT CGCCGATCAA TCGGCGTGGA TCTCCGCCGG AGCAACTCTC GGCGAGGTTT ATTACAGAAT TTGGGAGAAA AGCAAAGTCC ATGGATTTCC CGCCGGAGTT TGTCCGACGG TTGGTGTTGG TGGACATATA AGCGGCGGTG GTTACGGTAA TATGTTGAGA AAATTCGGAT TATCAGTTGA TAACTTGATC GATGCGAAAA TCGTCGATGT AAATGGTCAG ATTTTAGACC GGAAAGCAAT GGGTGAGGAT CTTTTTTGGG CGATTTGCGG CGGCGGAGGA GCTAGCTTTG GCGTCGTTTT GGGATACAAG GTCAAGCTCG TTCCTGTGCC AGAAACTGTT ACGGTTTTTA GAGTGGAGAA GTATATGGAT TCAGGAGCGG TGGATATGGT TCACAAATGG CAATCCGTTG GTCCGAAAAC CGACCGGAAT CTGTTTTTGA GAATGTTGAT TCAACAAGCG ACAAGGAAGA AGGTGAAGAC GGTGAGAGCT ACTGTGGTGG CTCTGTTTTT AGGCAGAGCA GACGAAGTTG TTGCGTTGCT TCGTAAGGAG TTTCCTGAAT TGGGTTTAAA GAAGGAGAAT TGTACGGAGA TGTCTTGGTT TCAGTCTGCT TTATGGTGGG ATAATCGTGT TAATGCTACT CAGATTGATC CTAAAGTGTT TCTTGATCGG AATCTTGATA GAGCGAATTT CGGGAAGAGG AAATCGGATT ACGTTGTGAG TGAGATTCCT AGAGATGGGA TTGAGTCTTT GTTCAAGAAG ATGATTGAGT TGGGGAAAAT CGGGCTTGTT TTTAATCCGT ATGGTGGGAA AATGGCGGAG GTTTCGGTTG ATGCGACCCC GTTTCCGCAC CGAAACAAGC TTTTCAAGAT TCAGTACTCG GTGACCTGGC AAGAAAACTC TGTCGAGATA GAGAAGGGTT TCTTGAATCA GGCTAACGTT CTTTATAGTT TCATGACCGG GTTTGTGAGC AAGAACCCCA GAAATGCTTA CTTGAATTAC CGAGATGTGG ATATCGGTGT GAACGATCAT GGTGCGAATA GTTATGAGGA AGGAGAGGTG TATGGAAGGA AGTATTTTGG AGATAATTTT GATCGATTAG TAAAGGTTAA AACCGCGGTT GATCCCGATA ATTTCTTCAT GAATGAACAA AGTATACCTA CCTTGCTTAG CAAGGCATAG 
Length1620
Protein Sequence
Protein Residue
Map Locationscaffold_7: 8955918.. 8957525
Download Sequence
A.thaliana
AGI-codeAT4G20840.1
DescriptionFAD-binding Berberine family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.31662 Ahg478409 alpha-L-arabinofuranosidase 1
6.9282 Ahg342616 AAA-type ATPase family protein / ankyrin repeat family protein
13.4164 Ahg491730 vernalization5/VIN3-like
14.0712 Ahg329795 G2484-1 protein
14.3527 Ahg930378 Cyclopropane-fatty-acyl-phospholipid synthase
14.8661 Ahg937338 hercules receptor kinase 1
16 Ahg951196 Glycosyl hydrolases family 31 protein
19.4936 Ahg484107 purple acid phosphatase 8
23 Ahg482239
29.6648 Ahg474074 Phosphatidylinositol 3- and 4-kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression