Detail



ID : Ahg491940

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|491940|fgenesh2_kg.7__1373__AT4G28320.1
Sequence
ATTATCCAAT TTCTTCTGCT TGTTCGTATA TCTCTTGTTT GCCTAAAATA TTTGTTAATT TTCTATAAAG GATTGATTTT TCCGTCTGGG TTTTATAAAA AGTTTGGATT TTTCTTCTGG GTGGGCACCG ACTAAAACAA AAGAACTGTT TCTCCAATTC TGGGTTTGAA ATTTGTGTGT GTGAAGCAGG AGATAGCAGA AGCATGGTTC CCACAAGGAA CAGGCCAATG CTACGAATTC TAGGGTTTTT TATATGTGCA GCTTTCATCT ATTTATCATT TCGGGATTTA TGGTTGAATC ACAAAGGGAA AGCAAAGTTA GGGTTTGTGA AAAGGAACGG AACTCAGTTT GTGGTGGATG ATAAGCCTCT CTATGTAAAT GGTTGGAACT CGTATTGGTT CATGGACCAT GCGGTTGATG AACATAGCAG AAACCTTGTC GGTGAAATGC TTGAAGCTGG AGCTAAAATG GGTCTCACTG TTTGTAGAAC TTGGGCTTTC AATGACGGTG GCTATAATGC ACTTCAGATC TCTCCTGGCC GATTCGATGA GCGAGTCTTT CAGGCTTTGG ATCATGTAAT TGCAGAAGCG AGAAAGCATG ATGTTAGATT GCTGCTTAGC TTAGTGAACA ACTTGCAAGC TTATGGAGGG AAGACACAGT ATGTGAACTG GGCATGGCAA GAAGGTGTTG GTGTCAGTTC TTCCAATGAT TCCTTCTTCT TTGATCCATC TATCCGCAAT TACTTCAAGA ATTATCTCAA GGTTCTGCTC ACCAGGAAGA ACTCGGTAAC TGGAATAGAG TACAGAAACG ATCCTACGAT TTTCGCTTGG GAGTTGATAA ACGAGCCTCG ATGTACGACT GATGTCTCTG GCAAAACTCT CCAAGACTGG ATAGAAGAAA TGACGGGATT CATTAAATCA ATCGATGACA AGCATCTCCT CACAGTAGGC CTGGAAGGTT TCTATGGTCC TAACAGCCCG AAACGGCTCA CAGTTAATCC AGAACAGTGG GCTTCCGAGC TCGGAACAGA CTTTGTTCAA AACTCTAATT CCTCAAACAT TGATTTTGCA TCCGTTCATA TCTACCCCGA TCACTGGTTT CATAATCAGA CCTTTGAAGA GAAGCTAAAG TTTGTGGTGA AATGGATGCA ATCTCACATT GAAGATGGCT TTAAAGAACT CAAGAAGCCA GTTCTCTTCA CAGAGTTTGG GCTCTCGAAC CTGAACAAGG ACTACGAACC ATCTCAGCGA GAGAAATTCT ACAGAATCAT CTTCGATGTG GTTTACAAAT CAGCCAAGCG AAAGAAGTCA GGTGCAGGCA CATTGGTGTG GCAACTATTC ATGGATGGCA TGGAAACTTT CAGCGATGAC TTTGGAATCG TTCCTCATGA ACAAGATTCC ATTTATAAAT TGATGATAGA ACAATCTTGC AGGTTGGGAA AAGTCACAGG ACGTCTTAAG GAACAGAACT TGAAAGAACT TTGTTCTCAC AAACATTGAG AGAATCACAT GTAAACTGTC TTTTTTTACA GTGAAATCTG ATTCTCATTT TTGTTGTATA CAGAATTAAC TCAGTGAGTA A 
Length1581
Protein Sequence
Protein Residue
Map Locationscaffold_7: 5438079.. 5440083
Download Sequence
A.thaliana
AGI-codeAT4G28320.1
DescriptionGlycosyl hydrolase superfamily protein
TAIR curator summary
Alias[AtMAN5][MAN5][endo-beta-mannase 5]
Gene coexpression
MR
MR Locus Description
22.9347 Ahg473256 auxin response factor 6
28.8444 Ahg951091
39.3065 Ahg479286 conserved peptide upstream open reading frame 30
51.2348 Ahg495984 Plant protein of unknown function (DUF828)
52.1536 Ahg471480 galacturonosyltransferase-like 3
83.2046 Ahg474403 Phototropic-responsive NPH3 family protein
84.9117 Ahg470882 Eukaryotic aspartyl protease family protein
90.7193 Ahg485893 plasma membrane intrinsic protein 2;5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression