| Annotation |
|---|
| Description | jgi|Araly1|479286|fgenesh2_kg.3__1987__AT3G18000.1 |
| Sequence |
GTGTGAATTG ATGCAGCAGA GAGGACGATC CGTCAATCGC AGATCACGAA GCTTCTCTAG ATCCAGACTC GCTGTCGAAG GCCATTGAAT TACTCTCTCC GCAGATCCTT CTTCTTCCGA AATGGCTGCA TCGTACGAGG AAGAGCGTGA TATCCAGAAG AATTACTGGA TAGAGCATTC GGCTGATTTG ACTGTTGAAG CTATGATGCT TGACTCCAGA GCTTCTGATC TCGACAAGGA AGAACGTCCT GAGGTACTCT CTTTGCTCCC TTCATATGAA GGCAAATCAG TGTTGGAACT TGGAGCTGGT ATTGGTCGTT TCACTGGTGA ATTGGCTCAA AAAGCTGGTG AACTCATTGC TCTTGACTTC ATTGATAGTG TCATCAAGAA GAATGAAAGT GTCAATGGGC ATTACAAGAA TGTCAAGTTT ATGTGTGCTG ATGTTACATC CCCTGACCTC AAGATCACTG ATGGATCCCT TGACTTGATT TTCTCCAACT GGCTGCTTAT GTATCTTTCT GACAAAGAGG TGGAGCTTTT GGCTGAAAGG ATGGTTGGAT GGATCAAGGT TGGAGGATAT ATTTTCTTCC GTGAATCTTG CTTCCACCAA TCCGGGGACA GTAAGCGGAA ATCCAACCCG ACTCACTACC GTGAACCTCG TTTCTATAGC AAGGTCTTTC AAGAATGTCA GACTCGGGAT GCTGCTGGGA ATTCATTTGA GCTCTCTATG ATCGGATGCA AGTGCATTGG AGCTTATGTA AAGAACAAGA AGAATCAGAA TCAGATTTGT TGGATATGGC AGAAGGTCAG CTCAGAAAAT GACAGAGGCT TCCAACGTTT CTTGGACAAT GTTCAATACA AATCCAGTGG AATCCTACGC TATGAGCGTG TCTTTGGCCA AGGGTTTGTG AGCACTGGTG GACTTGAGAC AACCAAAGAA TTTGTGGAGA AAATGAATCT GAAACCAGGA CAGAAAGTGT TAGATGTTGG GTGTGGCATT GGTGGAGGTG ACTTTTATAT GGCTGAGAAG TTTGATGTTC ATGTTGTTGG TATCGATCTC TCTGTCAACA TGATCTCTTT CGCGTTGGAA CGTGCTATTG GACTCAACTG CTCGGTTGAG TTTGAGGTTG CTGATTGCAC TACAAAACAC TACCCAGATA ATTCATTCGA TGTCATTTAC AGCCGTGACA CTATTCTGCA CATCCAAGAC AAACCAGCCT TGTTTAGGAC TTTCTTCAAG TGGCTTAAAC CGGGAGGTAA AGTTCTCATC AGCGACTACT GTAGAAGCCC CAAAACTCCA TCTGCTGAGT TTTCAGAGTA CATCAAACAG AGAGGATATG ATCTCCACGA CGTTCAAGCT TATGGACAGA TGCTAAAAGA CGCTGGCTTT ACTGATGTGA TCGCAGAGGA CCGTACTGAT CAGTTTATGC AAGTCCTGAA ACGTGAATTA GAAAGGGTGG AGAAAGAAAA GGAAGAATTC ATATCCGACT TCTCCAAAGA GGATTACGAT GATATTGTTG GAGGATGGAA GGCAAAGCTG GAGAGGTGTG CATCGGATGA GCAGAAATGG GGACTTTTCA TCGCCAACAA GAATTAAGCA AATCAAAATC TACTACTTCT ATGTTTTCTT CTTTCTTTGT TTCTTCAATA AAAATGTCAT TTCCGCTAGG TGATGATTAT GTGGACTTGT TGAGTGGTGT TAAATCTCTT CCTTATGTGA TATGTAAACC GAATTATGTT TGGTCTTTGA TTTGAAGAAT TTTCTTAATG CATTTGTGTT A |
| Length | 1781 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 7234187.. 7237447 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G17998.1 |
| Description | conserved peptide upstream open reading frame 30 |
| TAIR curator summary | Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF30 represents a conserved upstream opening reading frame relative to major ORF AT3G18000.1 |
| Alias | [CPuORF30][conserved peptide upstream open reading frame 30] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.68115 |
Ahg472662 | MLP-like protein 423 |
| 9.48683 |
Ahg317589 | O-Glycosyl hydrolases family 17 protein |
| 12.6491 |
Ahg480193 | O-Glycosyl hydrolases family 17 protein |
| 13.7477 |
Ahg486566 | FASCICLIN-like arabinogalactan-protein 10 |
| 13.8564 |
Ahg926666 | Glucose-methanol-choline (GMC) oxidoreductase family protein |
| 16.7332 |
Ahg489646 | NIMA-related kinase 3 |
| 17.8606 |
Ahg932026 | like AUXIN RESISTANT 2 |
| 18.1659 |
Ahg484625 | 60S acidic ribosomal protein family |
| 18.1659 |
Ahg497404 | 60S acidic ribosomal protein family |
| 18.4391 |
Ahg487523 | Eukaryotic aspartyl protease family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|