Detail



ID : Ahg492048

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492048|fgenesh2_kg.7__1481__AT4G27470.1
Sequence
CATCACCGTC GTTTGTCTTT AAAACCTTTT GCGATTACCA TCATCGCACG TTGAATATAC GTCGAGTTTA ACATCTTCCA ATCTCTGAAA GCCCTCCTCC TCTCTTCGAG CTTCATCATC ATCGTCTCGT CGTCGGATCT TACCTCTCAT GGAAGGGAAC TTCTTTATCA GGTCTGATGC TCAACGAGCA CATGACAATG GTTTCACAGT CAAACAAAAA CCTAATCTCA TCACGGCTCC AACGGGAGGT CAAGCTAATG AAAGTGGCTG TTTTGATTGC AACATCTGTC TAGATACAGC CCATGATCCG GTTGTCACTC TCTGTGGACA CCTTTTCTGT TGGCCTTGCA TTTACCAGTG GTTACATGTT CAGTTATCTT CTGTCTCCAT TGATCAGCAC CAGAACAACT GCCCTGTCTG TAAATCCAAC ATTACTATCA CCTCTTTGGT TCCTCTCTAT GGAAGAGGCA TGTCTTCGCC TTCTTCCACG TTTGGCTCCA AGAAACAAGA CGCACAGTCC ACGGATATAC CCCGCAGACC CGCTCCATCA ACCTTAAACA ATCCAATCAC CTCAGCGTCA TCTCTGAACC CAAGCTTGCA ACATCAAACT CTGTCTCCAT CATTTCATAA TCATCAGTAT TCCCCTCGTG GCTTCACCAC TACCGAATCA ACCGACCTTG CCAATGCTGT AATGATGAGT TTCCTCTACC CGGTGATTGG AATGTTTGGG GACATGGTCT ACACAAGGAT ATTCGGGACC TTCACAAACA CAATAGCTCA GCCTTACCAA AGCCAGAGGA TGATGCAGCG CGAGAAGTCT CTTAACCGGG TATCCATATT CTTCCTTTGT TGCATCATCC TTTGCCTCCT TCTCTTCTAG CTCCCTCTCT TCTTGTATAG TTTGTGATGT AAATAGGCTG TAAAACTCGA AGTAACTGTG GTATAACCAC TACTGCAGAC ACCATTGTTC CGAGTCAGGT CTCAAATTGC AGGCCAATAT CTTGTTGTGT ATTACATAGA TATCGAT 
Length1027
Protein Sequence
Protein Residue
Map Locationscaffold_7: 5769559.. 5771004
Download Sequence
A.thaliana
AGI-codeAT4G27470.1
DescriptionRING membrane-anchor 3
TAIR curator summaryEncodes a RING finger E3 ubiquitin ligase.
Alias[ATRMA3][RMA3][RING membrane-anchor 3]
Gene coexpression
MR
MR Locus Description
11.4455 Ahg480820 S-locus lectin protein kinase family protein
11.4891 Ahg481243 tetraspanin8
14.2829 Ahg328547 WRKY family transcription factor
18.8944 Ahg479191 ubiquitin protein ligase 6
22.7596 Ahg494469 NPR1-like protein 3
25.0998 Ahg943730 calmodulin-binding receptor-like cytoplasmic kinase 2
25.4951 Ahg951876 Protein of unknown function (DUF569)
32.187 Ahg491919 Leucine-rich receptor-like protein kinase family protein
32.311 Ahg920875 RING/U-box superfamily protein
34.8712 Ahg492223 ENTH/ANTH/VHS superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression