Detail



ID : Ahg494469

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494469|fgenesh2_kg.8__285__AT5G45110.1
Sequence
AAATTCTCTT CGTTTTTATC TCTTTGATAG ATCTCAATTT GCCTTCTCTT TGATCTTATC TTTTACGATT GTGCAGATCT CAATTCCTGA TTTTGTATTT CTTCAATCTT TCTTTGAGGG TTTTTTTCTC TCCCAATTTT GTTTGATTCC TTGTCCAAAG TTTCTTCCTT TCCTTATGAC TTTCTTTTGG TACATTGAAT CAGAGGTGCT AGAGTAATAG TTTCATAACT CAAATCCCCA AGTTTACAAA ATTTCCCCTT TTGGTTCTGT GTTTGGTTGA TTCCTTGTTA GAAATGTAAA TTTTGGGCTT TTGTATCTGA AACCGATCTT CAGACTTGTG TAATCTTGAT CTTCATGCAA CAAGATTGAT AATTCTGCAA AAAGAAGAAG AGAAAAATGG CTACTTTGAC TGAGCCATCA TCATCTTTAA GTTTCACATC TTCTCATTTC TCTTATGGTT CTATTGGGTC TAATCATTTC CCATCAAGCT CAGCTTCTAA TCCTGAAGTT GTTAGTCTAA GCAAACTCAG CTCCAATCTT GAGCAGCTTC TTAATAATCC AGATTTTGAT TACAGTGATG CAGAGATCAT TGTTGATGGT GTTCCGGTTG GTGTTCATAG ATGCATTTTA GCTGCAAGAA GTAAGTTTTT CCAAGAATTG TTCAAGAAAG AGAAGAAAAT ATCGAAAACT GAGAAACCTA AGTACCAGTT GAAAGAGATG TTACCTTATG GAGCTGTTGG TCATGAAGCT TTCTTGTATT TCTTGAGTTA TATCTACACT GGGAGATTAA AGCCATTTGC TTTGGAAGTT TCGACTTGTG TTGATCCAGT TTGTGCTCAT GATTCTTGTC GACCTGCCAT TGATTTTGTT GTTCAATTGA TGTATGCTTC ATCTGTTCTC CAAGTGCCTG AGCTAGTTTC ATCTTTTCAG CGACGGCTTT GTAACTTTGT GGAGAAGACC CTTGTTGAGA ATGTGCTTCC GATCCTTATG GTTGCGTTCA ATTGTAAGTT GACTCAGCTT CTTAATCAGT GTATTGAGAG AGTGGCGAGG TCAGATCTTT ACAGGTTCTG TATCGAAAAG GAAGTTCCTT CTGAAGTAGC AGAGAAGATT AAACAGCTTC GACTTATGTC CCCGCAAGAC GAAGAAACCA GTCCCAAGAT TTCGGAGAAA TTGCTCGAAA GAATCAGTAA AATTCTCAAG GCGTTGGATT CAGATGATGT TGAGCTTGTG AAGCTTCTTT TGACTGAGTC AGATATCACT TTAGATCAAG CCAATGGTCT GCATTATTCT GTGGTGTATA GTGATCCGAA AGTTGTTGCC GAGATTCTTG CTCTGAATAT GGGTGACGTG AATTTTCGGA ACTCCCGGGG TTATACTGTT CTTCATTTTG CTGCGATGCG TAGAGAGCCA TCGATCATTA TATCGCTTAT CGATGAAGGC GCCAATGCAT CTGAGTTTAC ATCTGACGGA CGCAGCGCAG TTAATATATT GAGAAGACTG ACAAATCCAA AGGATTATCA TACCAAAACA GCGAAAGGGC GTGAATCTAG TAAAGCTAGG TTATGCATCG ATATCTTGGA AAGAGAAATC AGGAAGAACC CCATGGTTCT GGATACACCA ATGTGTTCCC TTTCTATGCC TGAAGATCTG CAAATGAGAC TGATGTACCT AGAAAAGAGA GTGGGGCTTG CTCAGTTGTT CTTTCCAACG GAAGCTAAAG TGGCTATGGA CATTGGTAAC GTAGAAGGTA CAAGTGAGTT CACGGGTCTG CCACCACCTT CGAATGGGTT AACCGGAAAC TTGAATCAGG TTGATTTAAA CGAAACGCCT GATATGCAAA CCAAAAGACT TCTTACTCGT ATGGAGGCTC TAATGAAAAC AGTTGATACT GGTCGAAGGT TTTTTCCATA TGGCTCAGCG GTTCTAGATA GGTACATGGC TGAGTACATA GACGAAGACA TCCTAGATGA TTTACGTTTT GAGAAGGGAT CTACACATGA AAGAAGATTG AAGAGAATGA GATATAGAGA GCTTAAGGAT GATGTCCAAA AGGCATATAG CAAAGACAAA GAGTCTAAGA TTGCGCGGTC TTGTCTTTCT GCTTCATCTT CTCCTTCTTC TTCTTCCATA AGAGATGACC TGAACAACAC AACATGAAAG TGCACCATAA GTTAAATGTA ATTAGATATC TTTGTTAAAA GGGTTTTCTT TTTGGGTGTT CTTCAGATTT TATACAGATG CTTTAGGTTC AGTTTTAATA AAGAGAGATG GATAGTTAAA TGTATAGCAG TAAGATTAGG AATGCTGATT AACCCAAAAC ATTCTAACTA TATGCAATCT TTTGTTT 
Length2347
Protein Sequence
Protein Residue
Map Locationscaffold_8: 2323602.. 2326270
Download Sequence
A.thaliana
AGI-codeAT5G45110.1
DescriptionNPR1-like protein 3
TAIR curator summaryEncodes a paralog of NPR1. Involved in negative regulation of defense responses against bacterial and oomycete pathogens. npr3 mutants has elevated level of PR1 expression. Interacts with TGA2, TGA3, TGA5 and TGA6 in yeast two hybrid assays.
Alias[ATNPR3][NPR3][NPR1-like protein 3]
Gene coexpression
MR
MR Locus Description
17.72 Ahg473609 Protein phosphatase 2C family protein
22.7596 Ahg492048 RING membrane-anchor 3
22.9347 Ahg486080 WRKY DNA-binding protein 70
23.6643 Ahg470660 trehalose-phosphatase/synthase 7
24.5357 Ahg942971 Transducin/WD40 repeat-like superfamily protein
29.2575 Ahg488097 calmodulin-domain protein kinase 7
44.699 Ahg908800 Protease-associated (PA) RING/U-box zinc finger family protein
50.0799 Ahg483530 guanosine nucleotide diphosphate dissociation inhibitor 1
51.2445 Ahg951624 armadillo repeat only 2
51.788 Ahg921093 wall associated kinase 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression