Detail



ID : Ahg492399

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492399|fgenesh2_kg.7__1832__AT4G24470.2
Sequence
GTCTCGGAAG AAGTGCTGCG AATTTACCTA AAGTCACTTT TTTTTTACCG TCGGGTGAAT TGGACGACGG TCTAATCTCC CCTCCTCCAC ACGCGCCGAC CACCATCTCT CTCTTTTCCG ATGTTTGGTC GCCATTCTCA ATCGGTGATT ATCCCCAATA ACCAGATTGG TACCGCCTCT GCTTCCGCTG GTGAAGACCA TGTCTCTGCC TCCGCAACGT CTGGTCACAT TCCTTACGAC GATATGGACG AAATCCCTCA TCCTGACTCC ATTTATGGTG CTGCCTCCGA TTTGATTCCC GATGGCTCTC AATTGGTTGC TCACCGATCC GATGGCTCTG AATTACTAGT TTCTCGGCCA CCGGAAGGGG CTAATCAGCT CACGATCTCG TTCCGTGGAC AAGTTTACGT TTTTGATGCT GTTGGTCCTG ACAAGGTGGA TGCTGTGTTG TCGTTGTTGG GTGGTTCTAC TGAGCTTGCT CCTGGTCCGC AGGTGATGGA ACTAGCTCAG CAGAATCATA TGCCTGTTGT AGAATACCAG AACCGCTGTA ACCTTCCGCA ACGGGCACAA TCCTTGGATA GGTTTCGGAA GAAGAGGAAT TCTAGATGTT TCGAGAAGAA AGTAAGATAC GGTGTTCGCC AAGAAGTGGC CTTAAGAATG GCACGTAATA AAGGTCAATT CACGTCTTCA AAGATGACAG ATGGGGCTTA TAACTCGGGC ACAGATCAAG ATTCTGCCCA AGATGATGGC CATCCAGAAA TATCGTGTAC TCATTGTGGC ATTAGTTCCA AATGTACACC AATGATGCGA CGTGGCCCTT CCGGCCCCAG GACTCTCTGC AATGCCTGTG GACTTTTTTG GGCTAACAGG GGTACATTGA GGGATCTCTC AAAGAAAACA GAAGAGAATC AGTTGGCTTT AATAAAACCG TCTGATGGTG TGAGTGTTGC TGATGCTGCT AACAACTTAA ACTCTGAAGC TGCAACTGTT AAAGAACACA CTTCCATGGT TTCTCTTGCC AATGGGGACA ATTCTCATCT CTTAGGTGAT CACTAAATAC TGTGATAAGA TTCAGAAGAT AGAAAATCCT TGTAGAATCA GTTGGTCATC TCTATGAACT TATCTTTTCA CCATCACATG TATTATAGAA ACCATAACCG AACCTCAAAT CAAATACCAT ATCAGATGTC TTTGGTTTCG GAGTTTGTTA ATTGGAATA 
Length1219
Protein Sequence
Protein Residue
Map Locationscaffold_7: 7049849.. 7052101
Download Sequence
A.thaliana
AGI-codeAT4G24470.3
DescriptionGATA-type zinc finger protein with TIFY domain
TAIR curator summaryZIM is a putative transcription factor containing an atypical GATA-type zinc-finger motif.
Alias[GATA25][TIFY1][ZIM][GATA TRANSCRIPTION FACTOR 25][Zinc-finger protein expressed in Inflorescence Meristem]
Gene coexpression
MR
MR Locus Description
3 Ahg479428 RNA-binding protein 47B
7.61577 Ahg936878 Transducin family protein / WD-40 repeat family protein
16.6132 Ahg481178 Protein kinase superfamily protein
17.7482 Ahg322431 tubby like protein 3
22.5832 Ahg487414 ARM repeat superfamily protein
24.6577 Ahg477053
26.9444 Ahg944752 Protein of unknown function (DUF2012)
30.1662 Ahg943542 Protein kinase superfamily protein
31.749 Ahg942039 basic leucine zipper 9
32.9848 Ahg495825 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression