Detail



ID : Ahg479428

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479428|fgenesh2_kg.3__2129__AT3G19130.1
Sequence
TCTCTCTCTC TCTCTCCGCC TCCTTTTAAG ACCAACTCTC TCTCTAATCC ATCTCTCTCT CTCTCCGCCA TTTCCAGAGC TCAACGAGCT CTCACTTTCT TTACGCACTT CTTGGAACGA AAGATATTCA GAGAGAAGAA GAGGAATCTT GAAGTTCTTG AATCTAATAC AACTCGGTGA CTCTGTTTCC CATTTCCGGA GATCAGATCG GATCAAGATG CAGACAACCA ACGGCTCAGA TTCAACGTTG GCAACTTCCG GAGCCACGCC GCCGAATCAA CAAACCCCTC CTCCACCTCA CCAGTGGCAG CAACAACCAC CGCAGCAGCA GCAACAGTGG ATGGCTGCGG CCATGCAATA TCCAGCGGCG GCGATGATGA TGATGCAGCA GCAACAGATG ATGATGTATC CTCACCAATA CGTTCCGTAT AATCAAGGTC CTTATCAGCA TCATCATCCT CAGCTTCACC AATACGGGTC TTATCAACAG CACCAGCAGC AACACAAGCC TCTTGACCGT GGATCTGGAG ATGATGTCAA GACTCTCTGG GTTGGTGATC TTCTTCATTG GATGGATGAG ACTTATCTCC ACTCTTGCTT TTCTCACACC GGCGAGGTTT CTTCTGTGAA AGTTATACGT AACAAGCTCA CTTCTCAATC AGAAGGGTAT GGGTTTATTG AGTTTCTTTC ACGTGCTGCA GCTGAAGAAG TTCTTCAGAA CTATAGTGGT TCGGTGATGC CAAACTCAGA CCAGCCCTTC CGTATAAACT GGGCATCTTT TAGTACTGGT GAAAAAAGAG CAGTGGAAAA TGGTCCAGAT CTATCCATAT TTGTTGGAGA TTTGTCTCCA GATGTCACTG ATGCTTTATT GCATGAGACC TTTTTTGATA GATATCCTTC TGTCAAAAGC GCCAAAGTTG TGATTGATTC CAACACTGGC CGGTCCAAAG GTTACGGTTT TGTGAGGTTT GGTGATGAAA ATGAGAGATC AAGGGCTTTG ACAGAAATGA ATGGAGCTTA CTGTTCGAAC AGGCAAATGC GTGTAGGTGT TGCAACTCCC AAAAGAGCGA TTGCTAATCA GCAGCAACAT TCTTCACAAG CTCTGATACT GGCTGGTGGA CATGGAGCAA ATGGTTCCAT GGCTCATGGC TCGCAGTCTG ATGGCGAATC AACTAACGCA ACAATATTTG TTGGCGGCAT TGACGCTGAT GTTACTGACG AAGACCTCAG ACAACCTTTT TCCCAGTTTG GCGAGGTTGT TTCAGTGAAG ATACCAGTAG GCAAAGGATG TGGATTTGTC CAATTTGCTG ACAGGAAGAG TGCTGAAGAT GCTATCGAGA CTTTGAATGG GACAGTCATC GGCAAGAACA CTGTCAGACT CTCTTGGGGA CGAAGCCCGA ACAAACAGTG GAGAGGAGAC TCAGGACAGC AGTGGAATGG AGGATACTCA CGAGGACAAG GTTACAACAG TGGAGGAGGA TATGCTAACC ACCACGACTC CAACAACTAT CATGGGGAAA ATTGAAGAGA CTCATCAAGT GATCATCATC ATCATGGTTT CACACATCAA AGCTAAAACT TGTAGTGGAA AGGAGAATTT TGTTAGATGG ATTTGATTTT GATAAACTTG TTGTTTGAAG AAGGATTCGA AAATTTTGGT TACTGGTTTG TCTCAGACTA ATATAATGGT TGTGACTTGT TGGATCAAAA TTC 
Length1713
Protein Sequence
Protein Residue
Map Locationscaffold_3: 7766310.. 7769284
Download Sequence
A.thaliana
AGI-codeAT3G19130.1
DescriptionRNA-binding protein 47B
TAIR curator summary
Alias[ATRBP47B][RBP47B][RNA-binding protein 47B]
Gene coexpression
MR
MR Locus Description
3 Ahg492399 GATA-type zinc finger protein with TIFY domain
3.16228 Ahg928719 Calcium-binding EF-hand family protein
10.583 Ahg335524 Galactose-binding protein
13.2288 Ahg486400 Protein kinase superfamily protein
13.6748 Ahg937978 NAD(P)-binding Rossmann-fold superfamily protein
16.7332 Ahg476825
20.2978 Ahg478958 Protein phosphatase 2C family protein
24.2487 Ahg916356 Protein of unknown function (DUF567)
28.7228 Ahg951254 EXORDIUM like 2
30.9839 Ahg951486
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression