Detail



ID : Ahg492440

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492440|fgenesh2_kg.7__1873__AT4G24200.1
Sequence
AGTTATTGAA TATTTATTAC CAAAAAGAAT AAACGAAGAA AGCCTTTTCT TCTCTCTCGT TTTCGCGACA ACCTTTTCCT CGAAGAAGAA GAAGAACGAG GTTTTCTCAT AGAGCTGCCA ACCATCGTTG CCAAATCGTA ACAGAGTGAG AAATATATAC ACACATATAT ACAGAGGGAC AAGGAAGGGA TTGGGATATG CGAGTGGGCA TCGGTTCTGT CGGAACGGCT AACTCGCTTG ACCTAGGGTT TCGTCTTCCT TGTGCTTCAT GGACTTTTTC GAATGGGAGA AAGAACCTTT TTGCTTCATA ACAGTGTTCT ATATTTTTGG AGTTGTCATA AGTAAAGCAG TATGACGCTT GAAGATTTCT TTACCCTAAC AGAAATAAAA GATGGACTCA CGGTCACTTC TCGTGTTGAA GAGCTCGTGT CTGTTATGCA AAGTAATAAA GATTCAGTTT TGAAGAATAA TGGTGATGCT TCTAGACAAT GGACTGCTGT TGCAAGCACA ATTGCGGCCA CTAAGAACAG AGATTGTCTT GATGTTTTTG TAAATTTAGA TGGACTCGTT TACTTAAGTA GCTGGCTAGC TGAAGCTCAG ATGTTGGCTA ACGATTCAGT TGACAGATCT GTAGAGGAGT CAATTCTTGC TTTGTTAGAA GCTGTTGAAA ATCTAGGTGT AGACAGTTCG AAGTTAGTTT CTTCTGGGAT ATGGGTTGCT GTCAAGAAAC TTGTTGACCA TGGTAGTTCT CGGGTTCAGG ATCAGGCGAG AAAGCTCTTT GGTAGCTGGA AAGATAAGGA TGTGTATGAC CACTCTGAAC ATGACATTGA AAGCTGCAAC AAAATTCATG AAGATGAGAT GAGAGTCGTA GCAGCAAGCA TGGAGAGCAG TGGGCAAAAA TCTGCTGTTA CACTTTGTTC GACAAAAAGT AATAATGAAA AACACTGTCC TGAAATAGCA GATGAAGCCT TGCTGTCAGG ATGCTCAGAA GGAAACATCC CAGATCAAGA TGAGGGTTTG GAACTGCAGA ACGACAAGGC TGGGTTTGAC TCGAACGTGA ATTCCCATTG CTCGAATACG ATGACTGAAA CTGAAACTTT CAATGGTTCT TCGACGGATG ATATCATGAA AGAGGTTCAA GAAAAACTTT CCGTGAAGGA GAAAAGCTCT ATGAAGGGGA CAGGTGGTCC AACGATTTTT GGTACTATGC CTACTGGTTC TAGTAGCCTA CTTTATTTAG AGCGCGATAG TGTAGAAGGG CCATCAAATG CTCCACTGGG TGCTGAGATA CCCAAGGAAA AGCAGATGGC AAACTATTTT CTTGAAAAAT TGGGTGAAGC AGGGACATCT AGTGCAACAG GATATGTAGC TGTGTCTTCT GATTCTATGA TTGCCAGCAT GGAGTTGGAG AAAAATAGTC TTTTGCAGAG TAGTCTTGAT TCAAATGAGG TGAGCAAGAA TGCATCTGAG ACGATATGTG GGTCGCACGG TGCGAGCGTA GCCCATAATA GCAAACAGGT GTCTTCATTG ACTCATATAA CGGACAATCA AGATTCTGAC AGTTCATCAA GATTATCAGG TGGCCTTGGT AGAAGTAGAA AATTTGAGAG TGACAATTTA AATGCTCTTG CTGACAATGA AGGAAAAGAT GATATGGGTC ATTCAGACAA AAAGAGGAGA GTAAAACGGA TAAAAAAACG CAGCTCTTCT AGATCAATGA CCATATCCCA GCGCCTGGGA GCAATTGATA AAACAACTAC TGATATTGAT CTTGGTATTT TGGATGCCTT GGAGGTCGCT ACCAAAGTCG CACAAGAAGT CGCTAGAGAA GTAGACTCTG GAGAACCTTC TCATAGTTCT TCAGAAGAAC TATCCGATGA AAGCGGGCAG TCTGGTTCGC AAGACTCCCG CGATGATGAT GTACATACAG GTTCTCGATC TAAGGGATTA TCAGTAGGTG AAAACCATTC CTTTGAGGAA CCTAATGTTG GAGATGATGA TGTCATGGAT GAGAATGTTG ACAAACCTGA AAGTGATGAT GTTGAAGAAA GCCACTTAGC AGCAGCTGCT AAATCTGAAG TAGGCAGAGA GAAAAGCCCA TGTGGATTTG ATCTTAATCA AGATATATGT CCTGATGAAA CAGATGTCAT TATGTCCTCC ATATCTACAG CCCCTACTCC TATGTCTGTT TCATTTTCTG TCTCATCTTC TGGAATGCCT GCAGCAGCAC CGTTGCAATT GGAAAGATCT CTTAGCGGGA AAGGATCAGC TGCTACTAGT GTATTCCACC CAGCATTACC TCATAAAGTT CCTAGTGGGG ATTTAAGAGA AAAGCAGGTG ATTTCCCGTG GTATCGATCT GAACGTGGCT GAGCTAGGAG ATGATCAAGT TGAAGATCTG ACTCCCTGGA AACAGTTTCC TTTCTCCTCA TCAAACTCTA GGGGTGGAGA GTCTTCACAT GAAGCCAGTC TCCGAGGATC AAGCAGGTTC AACTTGGATT TGAATTGTAT GAACGAGGAC GATGAGATGC CTCCACCTTC TGAGTTGAAG ATGGAGACAA GATTGTTTTT AAGTCACAAT GGTCAGCAAA GCGCATCACC TGTCTCCTCA TCGTCAGTTG CTCAGCAATC AGGCAAGGAA GTTAACTTTG ATTTGAATGA CAGGCCACAG TTTTTCATCG ATTCACGTGA TCAGGGTCCC TACTATGGGC GGCACCCATG GAGTACGGCC TCCTATGGAG GGCACAAATT GGAAGAACCA GGTATTTCTA TCTTGGGTAC AAAAGTGGAT GTTGATAGAA AAGAGTCTGG ATCTCAGATG GCTTCGTTCT TGTCCAATGG CAAGTCCCTC GAACCTGCAG CAGGATTATA CATGGGAAGA ACGGGAACCT CTTTGGGTCT AGCCCCAGGT GTCTCCTTTT CTCCAGCTCC TATTTATGGC TACAACGGAA TGAGTGGTCC TCCTGGTTTG TCAATGTCAT CGCCAATGTA TGTTCCTGGA ACTGCTATTC CATACATGGT GGATTCAAGA GGTACTCCAG TGATGATGCC GCAAATAATC GGATCGACCC CGTATGTGCA GCCACCATTC CCTCAACAAC ACATGTTCAT GAGCTTGGCG GGTGGATCCC CTAGTATGAA TGGATCAGTG CGGCCAAACT TTGATCAGAA CTCTGGGTTT GGACTTGAGA TAGGAAACAG AGAGTCGATA AATTTGAGGC AGTTTCTATC GCCGTCACAA AGCGGGGCAA TGGGAGAGCA TTCGGGAGCA AATGTAGAGC CCTCATCGAG TTCGTCTATT AGCATTGGTG GAAAGCGAAA AGAGCCGGAG ACACGGTGGG AGTTCCCTCC ATGGAGGTGA GTGATGTACA AGTGGTGGGG ATGGGTTCTT GAATAGGTTG ATGAATTGAT TGATTGGTCA AAGGATGATG ACAAGTGTTG AGGTAACTTA TAAAGTGGTC TTGCTGAACT TTTCTCTCAG TTTTCCCTTT TTCAGGTTTT TTTATTTTAT TTTATTTCAT AACATATAGG AGGATTAGTT CAAACATTTG GTATATGTCA AGCTTCTTTT TTAACCTTGT TGGGTTTTTC TCCATAAATA AATATATAGT TTTAAGATAC AG 
Length3622
Protein Sequence
Protein Residue
Map Locationscaffold_7: 7152979.. 7157281
Download Sequence
A.thaliana
AGI-codeAT4G24200.1
DescriptionTranscription elongation factor (TFIIS) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.44949 Ahg311407 Beige/BEACH domain ;WD domain, G-beta repeat protein
9 Ahg470660 trehalose-phosphatase/synthase 7
11.3137 Ahg324546 homeodomain GLABROUS 1
14.6969 Ahg938101 Duplicated homeodomain-like superfamily protein
14.8324 Ahg934680 binding;RNA binding
27.4955 Ahg889705 O-fucosyltransferase family protein
28.5657 Ahg929511 phospholipase D P1
31.9374 Ahg894331 Transducin/WD40 repeat-like superfamily protein
32.8634 Ahg912607 nucleic acid binding
33.6749 Ahg919385 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression