Detail



ID : Ahg894331

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|894331|Al_scaffold_0006_2327
Sequence
ATGGAATCTC TAATTGAAGA AGAAGAAGAA GAAGAAACTC GATTTTTCGA TGCTCTCGAA GAAATCGCAT CTTGTTCAAG TACAAGTCTT TGTAGAATCG AGTACGATGA ATCTCTATCG TCGATTTCTG GGGATTTTCG ATACGATGTT TGGATCAAAA GCCCAGGAAA CACTGAGGAG CGTCGTCAGA AGTTTTTGAA CTGGATGGGT TTAAGTAGTA CTGTGAAGGC AGATAAATCA GGTAATGTGA ATCGTTTGTC GAGCTCGGTT AATGAATCAG CGGTTTTGAT GGGTTTGAAA TCTGATGATG ATGAGTTTAG CTCTTGTCGT TGTGATTCTT CTGTGTTTAG TCCAAGTGAG AGTGTAGATA GAATTGTGAA AGAGGAAGAA GTAGATAGTC GAATGGTTTT GAGGAATTTG GGTTTTGGTG ATGATGATGA TGATGAGATT AGCTCTAGTC TTTGTTCTGT ATTGTCATCA CCTGTATCGG GTTCAACGGA TAGGTTTGTG AAGGAAAATG GTGAAGCGTT ACCAGACCCG ATGGTTGCTG CGGAGCAAAG GGATGTAGGT GGGATTATGA AGAGGGTTAA GGAGAAATGG TTGAGTCGGC TGTACAAAGT GCGGAGTAAG CAGAGTGCGG GAGATGATAA TGGTGGTGAA GTTGCGGTTT GCGGGAGTAG GATTGAGAGA GTTAAGGTGA AAGAGTATAA GAAAGAGGCT AAAGAGCTTT CTGCTCTTTT TAAAGGTCAA GAGATACAAG CTCATGAGGG AGCGATTCTC GCTATGAAGT TTAGTCCTGA TGGGAGGTAC CTTGCCAGTG CCGGTGAAGA CGGGGTTTTG CGGGTTTGGA GTGTTGTTGA AGATGAAAGA TGTGAAGAAC ATGACGTTCC TAAGATTGAT CCTTCTTGTA TATACTTTGA AGTGAGCAAA CTCTCTGAGT TGAGACCTGT GGCTGTAGAA AAGGATGGTA TTACTGGTTC TTTGATGAGT CCAAGGAAGA CAACAGAGTC TGCTTGTGTC ATTATTCCCC CAAAGATTTT CCGGGTTCTT GATAAACCAC TTCACGAGTT TCTTGGTCAT AGTGGTGATA TCCTTGACAT CTCATGGTCC AAGAACAATC GTCTGTTGTC AGCTTCAGTA GACAATAGTG TTCGGCTTTG GCAGATCGGC CATGAGGACT GTCTTGGCAT CTTTTCTCAC AGTAACTACG TTACGTCTGT TCAGTTTAAC CCGGTTGATG ATGATCACTT CATCAGTGGT TCGATAGATG GAAAAGTACG TATCTGGTCA GCTTCTCAGT GCCAAGTTGT AGATTGGGCC GACGCTAGAG GCATTGTAAC CGCAGTTTGT TATCGCCCAG ATGGGCAGGC AGTGATTATC GGAACTTTGA CAAGCGATTG TCGCTTCTAC AATGTATCAG GCCACTGCCT TCAACTCGAT GGTCATATAT GTCTGCACAA CAAAAAGAAG TCGTCAAATA AACGAATAAT CGGCTTTCAG TTTCTTCTGC AGTTTGATTT TACCGACCCA AGCAGAGTCA TGGTGGCATC CGCAGATTCA CAAGTGAGGA TCATCAGCGG TCGCAACGTT GTCCACAAAT ACAAAGGATC TCGAAATGCT GGAAACCAGA TATCGGCATC TTTTACAGCA GACGGGAAGC ATATAGTATC AGCGTGTGAC GACTCCTCAG TCTACGTCTG GAACTGCGTT GGACACGACC CTGAACAGCC ATCTCCTGGT TTTTTCTCTC ACACCAAACG ACTTAAAATC CGATCGTTCG AAAAATTCTC TGCAGATGTC TCAGTCGCTA TCCCGTGGTG TGGATTTACG CCTGTACTCT CCGGCGGATC AGAGCTATCG CCATCGCTTT TCTCATTGGG GAGAGAGTAC GTTCTCGATT CTCCCAAGGG ATCCGCCACT TGGCCGGAGG AGAAGCTAGC GAGCTCGTTT TCTCCAGTGA AAGCGATCCG TAGATCACAT TACAAATTCC TCCGATCGTC GTGCCGGAGA ACGTCGGAGT CATCTCATCT CTGGGGATTG GTTATAGTCA CCGGCGGGTG GGATGGACGG ATCAAATTGT TTCACAACTA TGGTTTGCCT GTTCCCGTTT GA 
Length2112
Protein Sequence
Protein Residue
Map Locationscaffold_6: 9993262.. 9996078
Download Sequence
A.thaliana
AGI-codeAT5G24320.2
DescriptionTransducin/WD40 repeat-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.48074 Ahg323761 gamma response gene 1
10.3923 Ahg474601 DNA/RNA-binding protein Kin17, conserved region
12.8062 Ahg487067 ubiquitin-protein ligase 4
15.1987 Ahg496010 FTSH protease 9
15.3297 Ahg485811 peptide transporter 1
17.9722 Ahg894157 ARM repeat superfamily protein
19.1833 Ahg471398 C4-dicarboxylate transporter/malic acid transport protein
20.199 Ahg474702 sodium hydrogen exchanger 5
20.4939 Ahg333551 dicer-like 1
21.8174 Ahg484555 ARM repeat superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression