| Annotation |
|---|
| Description | jgi|Araly1|492441|fgenesh2_kg.7__1874__AT4G24190.1 |
| Sequence |
CATCATCACT GAGTAACCCG AAAGCAAAAG ACTGAGAGAG TACCAAGCGA TCTAACAATG AGGAAGAGGA CGCTCGTGTC CGTTTTGTTC CTTTTCTCGC TTCTGTTTCT TCTTCCAGAT CAAGGAAGAA AGTTACACGC GAATGCAGAA GATAGTTCCG ATGACCTTAC AGATCCACCA AAGGTTGAGG AAAAAATTGG TGGTCACGGC GGTTTATCGA CGGATTCCGA TGTAGTTCAT AGAGAGTCTG AGTCGATGTC AAAGAAGACG CTTCGCAGTA ACGCGGAGAA GTTTGAGTTT CAGGCTGAGG TTTCTCGGCT TATGGACATT ATTATCAACT CTCTATACAG TAACAAGGAT ATTTTCTTAA GAGAGTTGAT CTCCAATGCT TCTGATGCCT TGGACAAAAT TAGGTTCCTT GCACTCACTG ACAAAGACGT TTTGGGTGAA GGTGACACTG CTAAGCTTGA GATCCAGATT AAGCTTGACA AAGCCAAGAA GATTCTTTCT ATTCGGGATA GGGGAATTGG TATGACTAAG GAAGACTTAA TCAAGAACCT TGGTACCATA GCAAAATCTG GAACGTCAGC TTTTGTTGAG AAGATGCAAT CAAGCGGGGA TTTGAACCTT ATTGGACAAT TTGGAGTTGG ATTCTATTCT GCCTATCTTG TTGCTGACTA CATTGAAGTC ATTAGCAAGC ACAATGATGA CAGCCAGTAT GTATGGGAAT CAAAGGCTGA TGGTAAATTT GCTGTTTCCG AGGATACATG GAATGAGCCT CTTGGACGTG GAACCGAAAT TAGATTACAT CTTAGGGATG AAGCTGGCGA GTACCTAGAA GAAAGTAAGC TTAAGGATTT GGTGAAGAGA TATTCTGAAT TCATTAACTT CCCTATCTCT CTCTGGGCTA GCAAAGAGGT TGAAACCGAG GTCCCAGTTG AGGAAGATGA ATCAACTGAT GAGGAAACTG AAACCCCCTC TACCGAGGAA GAAAAGGAAG AAGATGCTGA GGAGGAAGAT GGTGAGAAAA AGCAGAAAAC CAAGAAGGTG AAAGAAACAG TTTATGAATG GGAGCTTCTG AATGATGTTA AGGCTATATG GCTGAGAAGT CCAAAGGAGG TGACGGAGGA AGAATACACT AAATTCTACC ACTCTCTCTC AAAGGATTTT ACCGAAGAGA AGCCAATGGC TTGGAGTCAC TTTAATGCTG AAGGTGATGT TGAATTCAAG GCTGTGTTGT ATGTTCCTCC GAAAGCTCCC CATGATCTAT ACGAGAGCTA CTACAACAGC AACAAGGCGA ACTTGAAGCT ATATGTCAGG AGGGTATTCA TCTCAGATGA ATTTGATGAG CTTCTGCCTA AGTATTTGAG TTTCTTGAAG GGTCTTGTTG ACTCTGACAC ATTGCCTCTA AATGTATCAC GAGAAATGCT TCAACAACAT AGCAGCTTAA AGACAATTAA GAAGAAGCTT ATCCGAAAGG CACTTGATAT GATCCGCAAG CTTGCTGAAG AAGATCCTGA TGAGATCCAT GATGATGACA AAAAAGATGT GGAGAAGTCT GGTGAGAACG ATGAGAAGAA GGGTCAATAC ACAAAATTCT GGAATGAGTT TGGCAAGTCG GTCAAACTAG GCATCATTGA GGATGCTGCT AACAGGAACC GCTTGGCAAA ACTTCTTCGT TTTGAGACAA CAAAGTCCGA TGGAAAATTG ACTTCCCTGG ATCAGTACAT TAAGAGAATG AAAAAGGGGC AAAAGGACGT ATTTTACATC ACAGGAAGCA GCAAGGAACA ACTGGAGAAA TCTCCATTCC TGGAGAGGCT CATCAAGAAG GGCTATGAGG TTATCTTCTT CACAGACCCT GTTGATGAAT ACTTGATGCA ATACCTGATG GATTACGAAG ACAAAAAGTT CCAGAATGTG TCAAAGGAAG GACTGAAGGT TGGGAAAGAT TCAAAAGACA AGGAGCTGAA GGAGGCATTC AAGGAGCTAA CCAAGTGGTG GAAAGGGAAT CTCGCTAGCG AGAACGTGGA CGATGTCAAA ATCAGCAACC GTTTGGCTGA CACTCCCTGT GTAGTCGTAA CGTCCAAGTT TGGATGGAGT GCAAACATGG AGAGGATCAT GCAGTCTCAA ACTCTCTCTG ATGCTAATAA GCAAGCTTAC ATGCGCGGAA AGAGAGTCCT CGAGATCAAT CCACGACATC CTATCATCAA AGAACTCAAG GATAGAATTG CAAGTGACCC AGAGGATGAG AGTGTGAAAG AAACAGCACA GCTCATGTAC CAGACGGCTT TGATCGAGAG TGGATTCTTA CTCAACGACC CAAAAGACTT TGCAGCCCGT ATCTACAACT CCGTCAAGAG CAGCCTGAAA ATCAGCCCTG ATGCAGTAGT TGACGAGGAA GTCGAGGCAG CAGAGGAACC AGAGACCAGT GAGGCAACTG AGACGAAATC AGATGACTTG GCTGGTGGTC TAAACATTGA AGCCGAACCC GTTGAGCAAC AAGAAGAGAA CACCAAGGAC GAACTGTAGA TTTTACTTCT GATGGTTCTC CTTTGTGTTT ACTATGGCTT TTTTAGTTTA AAGCAGAACA TCGTTTTACT CGAATCTCAA GATTAGTTAA ATTAAGCAGT TTTTGATGGA TTATGTAAAC GCACTACTTG GATTCTAGAG ATCAACGAAC CCAAACTTCT TCTTTTCAAT ATATGAGTTT TA |
| Length | 2712 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 7157964.. 7162158 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G24190.1 |
| Description | Chaperone protein htpG family protein |
| TAIR curator summary | encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat. Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues. |
| Alias | [AtHsp90-7][AtHsp90.7][HSP90.7][SHD][HEAT SHOCK PROTEIN 90-7][HEAT SHOCK PROTEIN 90.7][SHEPHERD] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg924468 | Heat shock protein 70 (Hsp 70) family protein |
| 2 |
Ahg919674 | calreticulin 1b |
| 2.23607 |
Ahg471010 | calreticulin 1b |
| 2.64575 |
Ahg489792 | Nucleoside diphosphate kinase family protein |
| 3.4641 |
Ahg493781 | Heat shock protein 70 (Hsp 70) family protein |
| 3.4641 |
Ahg476916 | PDI-like 1-2 |
| 3.60555 |
Ahg488863 | staurosporin and temperature sensitive 3-like A |
| 4 |
Ahg496347 | calnexin 1 |
| 4.24264 |
Ahg493210 | heat shock protein 70 (Hsp 70) family protein |
| 5.65685 |
Ahg935735 | thioredoxin family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|