Detail


ID : Ahg471010

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471010|fgenesh2_kg.1__964__AT1G09210.1
Sequence
ATGGCGAAAT TAATCACTAG CCTCGTCTCT CTGATTCTTA TCGGTCTCGT CGTCGCCTCC GCGGCAGTTA TCTTCGAAGA GCGCTTCGAT GATGGATGGG AAAGCAGATG GGTTAAATCT GAGTGGAAGA AGGATGATAA CACTGCTGGG GAGTGGAAAC ACACTGCTGG AAATTGGTCT GGTGACTCTA ACGATAAAGG TATCCAGACT AGTGAGGACT ACAGATTCTA CGCCATTTCA GCTGAGTTCC CTGAATTCAG TAACAAGGAC AAAACCTTAG TCTTCCAGTT CTCAGTCAAG CACGAGCAAA AGCTTGACTG TGGTGGTGGC TACATGAAGC TGCTCAGTGG TGATGTTGAC CAGAAGAAAT TTGGTGGAGA CACCCCATAC AGTATCATGT TTGGTCCCGA TATCTGTGGC TACAGCACAA AGAAAGTGCA TGCTATCCTT ACCTACAATG AAGCCAACCA CCTGATCAAG AAGGATGTTC CATGTGAAAC TGATCAGCTT ACCCATGTGT ACACCTTCAT CCTCCGCCCA GATGCAACTT ACAGCATTCT CATCGACAAT GTTGAGAAGC AAACGGGTAG CCTTTACTCT GACTGGGATC TTCTCCCACC CAAGAAGATC AAGGACCCCA GCGCCAAGAA GCCTGAGGAT TGGGACGACC AAGAATACAT TTCTGACCCT GAAGACAAGA AACCTGACGG ATACGATGAT ATCCCAAAGG AGATCCCAGA CACCGACTCA AAGAAGCCTG AGGACTGGGA TGATGAAGAA GATGGTGAGT GGACTGCCCC GACCATCCCC AACCCTGAGT ACATGGGTGA ATGGAAGCCT AAGCAAATCA AGAACCCCAA CTACAAGGGC AAGTGGAAGG CACCAATGAT TGACAACCCT GACTTCAAGG ATGACCCAGA GCTCTATGTC TTCCCCAAGC TGAAGTATGT TGGACTCGAA TTGTGGCAGG TGAAATCAGG ATCGCTGTTT GATAATGTCT TGATCTGCGA TGACCCAGAC TACGCCAAGA AGTTGGCAGA TGAAACATGG GGAAAGCTCA AGGATGCGGA AAAAGCAGCT TTCGATGAGG CGGAGAAGAA GAATGAGGAA GAGGAATCCA AGGACGCACC TGCAGATTCT GATGCTGAAG AGGAACCAGA GGATGATGAT GGAGATGAAT CAGATTCTGA ATCTAAGGCT GAGGAGAGCA AATCAGAAGT TAGCGAGGAA ACTGCTGAGA AAGACGCTAC CGCTCATGTA TGTTACCATA ATGTCACATT AATATTTTAC CATCCTTAAA GCTGTAGGGG AGTGACGTTC AAGATTTGAA GACCAAAGTT TTCAGAGTCT TTATTGTTTT ATCCTTTCTT TTGAAGTATT TTAGCATCTA GTAGTTTGTC GGAGAGATAG AATCAAGTTT TAGCAAAATT AAAATGGGGA TACAATGACT GTCGGATGCT CCTTTTAGAC TTGAACATGA AGAAGTTTTG CAGTTGCATC TCTTTCTCTA GTCTTGTTTC
Length1520
Protein Sequence
Protein Residue
Map Locationscaffold_1: 3346950.. 3350553
Download Sequence
A.thaliana
AGI-codeAT1G09210.1
Descriptioncalreticulin 1b
TAIR curator summaryEncodes one of three Arabidopsis calreticulins.
Alias[AtCRT1b][CRT1b][calreticulin 1b]
Gene coexpression
MR
MR Locus Description
2.23607 Ahg492441 Chaperone protein htpG family protein
2.44949 Ahg935735 thioredoxin family protein
3.16228 Ahg919674 calreticulin 1b
6.32456 Ahg489792 Nucleoside diphosphate kinase family protein
7.74597 Ahg924468 Heat shock protein 70 (Hsp 70) family protein
8.3666 Ahg496347 calnexin 1
9.53939 Ahg493781 Heat shock protein 70 (Hsp 70) family protein
10.2956 Ahg352403
10.6771 Ahg932129 copper ion binding;cobalt ion binding;zinc ion binding
11.225 Ahg495994 rotamase CYP 7
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression