Detail



ID : Ahg492502

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492502|fgenesh2_kg.7__1935__AT4G23660.1
Sequence
GATTCGAAAC GCCATTGACG TTCTAGATTC TTGAGGCTTC ATCACTCGAA ACTGAAATTA GATAGTTTTT TTTTCATACT CTGATTCTCT TGAGAAGTTA GCTTTCGTTC GTAAGACGTT TGAAATCTCA AGTCTTTGTT TCTTTCAGGC AACAATTTCT CTCAAAGATG GCGTTTTTTG GGCTGTCCCG TGTTTCAAGA CGGTTGTTGA AATCTTCCGT CTCCGTAACT CCATCTTCTT CCTTTGCTGT TTTGCAATCA CAACATAAAT CCTTGTCCAA TCCTGTTACT ACCCATTACA CAAATCCTTT TACTAAGTAT TATCCTTTAT GGAATGATAA CCACCAAGTA TGGAGTAAAG GGAAGGAATT GCATCAGGAG AAGTTTCTTG GTGTTGGCTG GAATTACAGA TTAGTTGGTG GAATGTCGTC GTCTTCTTCG GTTTTGGAGG GAAAGCCTAA GAAAGATGAC AAGGAGATGA GTGATGGTGT TAAGGAAGCT TCTTGGATTG ATTTGTATTT GCCTGAAGAA GTTAGAGGTT ATGCTAAGCT TGCTCGATTG GATAAACCCA TTGGCACTTG GTTGCTTGCT TGGCCTTGTA TGTGGTCGAT TGCGTTGGCT GCTGATCCTG GAAGCCTTCC AAGTTTTAAA TATATGGCGT TATTCGGTTG TGGAGCACTA CTTCTTAGAG GTGCCGGCTG TACAATTAAT GATCTGCTTG ATCAGGACAT AGATCCAAAG GTTGATCGTA CAAGACTAAG ACCTATCGCC AGTGGTCTTT TGACACCATT TCAAGGAATT GGATTTCTTG GGCTGCAGTT GCTTTTAGGC TTAGGGATTC TTCTCCAACT TAACAATTAC AGCCGTGTTT TAGGGGCTTC ATCTTTGTTA CTTGTCTTCT CCTACCCACT TATGAAGAGG TTTACATTTT GGCCTCAAGC CTTTTTAGGT TTGACCATAA ACTGGGGAGC ATTGTTAGGA TGGACCGCTG TAAAAGGAAG CATAGATCCA GCTGTTGTAC TCCCTCTTTA TCTCTCAGGA GTCTGCTGGA CCCTTGTTTA TGATACTATT TATGCGCATC AGGACAAAGA AGATGATGTA AAAGTTGGTG TTAAGTCAAC AGCCCTTAGA TTCGGTGATA ATACAAAGCT TTGGTTAACT GGATTTGGTA CAGCATCCAT GGGCTTTCTT GCACTTTCTG GACTCTGTGC AGATCTCGGG TGGCAATATT ACGCATCACT GGCCGCTGCA TCAGGACAGC TAGGATGGCA AATAGGGACA GCTGACTTAT CATCTGGTGC TGACTGCAGT AGAAAATTTG TGTCAAACAA GTGGTTTGGT GCTATCATAT TTAGTGGAGT TGTACTTGGA AGAAGTTTGC AATAAGACAC TCTCTGTTAA CGAATGAGGA TGAAGCTGTA GAATGATGAA CCTATATATG AAGAATTGAA GTAGACTCTA TAGAGACAGT TGAAGTGGAA CAGAGGACAT GGTCTTGCTA CAAAGTGGGT CTCTTTCAGG ACCGAAAGGA GCCATTGCAG AGAAGCTGAA ACTTTACTCT TTTAGATTAG TTGTTTGGGA TTCATTTTAC TTTTGGCTTT TATAGTTGAC AT 
Length1612
Protein Sequence
Protein Residue
Map Locationscaffold_7: 7414747.. 7418540
Download Sequence
A.thaliana
AGI-codeAT4G23660.3
Descriptionpolyprenyltransferase 1
TAIR curator summaryEncodes para-hydroxy benzoate polyprenyl diphosphate transferase. The enzyme was shown to be able to use a wide range of prenyl substrates : from GPP (C10) to decaprenyl diphosphate (C50).
Alias[AtPPT1][PPT1][polyprenyltransferase 1]
Gene coexpression
MR
MR Locus Description
15.748 Ahg484217 mediator subunit 8
21.6333 Ahg940460
28.5307 Ahg485362
30.9677 Ahg941655 BTB-POZ and MATH domain 5
31.4325 Ahg895553 cardiolipin synthase
35.2136 Ahg897235
36 Ahg482949
37.9473 Ahg490016 YTH family protein
39.2428 Ahg950645 myosin heavy chain-related
39.7995 Ahg473564 inositol polyphosphate 5-phosphatase I
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression