Detail



ID : Ahg897235

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|897235|Al_scaffold_0005_1201
Sequence
ATGTCCATTG AGGGATATGA CACTTCGCTT CATGCATTGA GAAAACATTT CTCTTCATGC GGAAAGATCA AACATATCTA TGTTCCAAGA GACTTTGAAA GTGGTACCCT CAAGAGAGTT GCTTTCATGA GGATTGAGGG AGAAGGTGCC GAAGACAAGG CATTGGAACT TAGTGGAACT GACGTGGGAG GATGGACTGC AATAGAGAAG GCGCTAAAAC TAAGTGGATG TAACGGGGGA GGAATGACCC TTGTAGTCAG CCCTGTTCAG CTTGTACCGG AAAATGTAAG AGAAAGAAGC CGCTCAACCA ATATTACTGG CTATGGCCAT GTTCGGAACG TTGTCGCTGC GACTACGTTC GGCGACTGA 
Length369
Protein Sequence
Protein Residue
Map Locationscaffold_5: 11782190.. 11782409
Download Sequence
A.thaliana
AGI-codeAT3G44717.1
Description
TAIR curator summaryPseudogene of AT5G03495; nucleotide binding protein
Alias
Gene coexpression
MR
MR Locus Description
16.3707 Ahg482122 cofactor of nitrate reductase and xanthine dehydrogenase 2
16.9115 Ahg490668
18.3303 Ahg492266 C2H2-like zinc finger protein
19.2614 Ahg489866 light-mediated development protein 1 / deetiolated1 (DET1)
19.6723 Ahg473107 Apoptosis inhibitory protein 5 (API5)
24.7386 Ahg312926 cytomatrix protein-related
30.4959 Ahg472400 Calcium-binding EF hand family protein
31.7805 Ahg943539 Vps51/Vps67 family (components of vesicular transport) protein
31.9061 Ahg481243 tetraspanin8
33.2866 Ahg350146
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression