Detail



ID : Ahg492615

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492615|fgenesh2_kg.7__2048__AT4G22540.1
Sequence
CTTACGCAGT CTCACATTTA AGCAATCTCT CTCTCTCTCT CTCTCTCTTT CTCTGAGAAA AATCTCAGTT CCTCAGAGCT CTCAGGTTCT TTTATTCTTC TTCTTCGATT TTATCTCCCA AATCTGCATG CTCTCGATCT AAGACGAATG TTGCTTCGTA GTTTTATGAT CTGAGAGAGA TCAAATCCGT CACCGGAGAA AAAAATGCGG GTGAAGGAGT TGCATCCACT TTGTTGTATT ACTTTAGAGA GTCCACACGG GATTAATAAT AACCAGTCAC CGGAAGAACC GGTGACGACG GCTTTAACTA GGTCAAGGAG TTTACCGGCG AAGTCGTTAA TCGGTGGAGC CAAAGTGGGA TCGGAATCGG AGACTGTAGC TGGGATCTTA TATAAATGGA CTAATTTTGG TAAAGGATGG AGATCTAGAT GGTTCTTACT CCGTAACGGA ATCTTATCTT ATTCTAAGAT CCGTCGACCG GAGAATTTGA ATCTACTTTC TCCGTCAGAT GATGTGAGGT TAATCGGAGA TATTTCCGGT GAACGTCTTT CGAGAATGGA TAGTTGTAGT GGTCGCCGGA AACAACAAAA AACCGTCGGC ATTGTTCATC TTAAGGTTTC GTCTTTCAGA GAAAGCAAGT CGGATGATAG AAAGTTCTAT ATATTCACAG CAACCAAGAC CCTTCATTTG AGGACTGATT CTATAAGTGA TAGAGCGGCT TGGTTACAAG CATTAGCATC TACAAAATGC ATCTTTCCTC TCCGGTCGCT TAATGGGGAT TTCTCCTTTA TACCACCAAA GGATTTGTCC ATATCAACTG AGAGGCTAAA GAAACGGTTG CACGAAGAGG GAATGAATGA GAATCTTGTA AAAGAGTGCG AACAGATCAT GCTCTCAGAA TTTTCTGAAA TGCACGGACA AGTTAAGCTT TTACACGAAG AACGGACGAA TTTGCTTGAC GCATTGAGGC AGCTAGAGGC AGCTAATCTC GAAGTTGGCG CATCAGGGAA GCATGAGTTT TCAAGCCTAG GACGTGGAAA GTATAGTGAA TGCAGCACAA CTGCTTCATC TGATGATAAA CAAGAGTTTG AGGATGTGTC TGAGGAAGAT GAACCTTCCT TCCATGACAC AAAGGAGTTC TTTCATGAAC CTAATGTTGG TTCTGAATCA AATCTAGCTA TTTCTGGACA CGCGGATATC AAGAGAAGAA CGAAACTTCC TGATCCAGCT GAAAAAGAGA AAGGTGTCAG TCTTTGGTCT ATGATCAAAG ACAACGTTGG AAAGGATCTC ACCAGAGTTT GCCTCCCTGT GTATTTCAAT GAACCAATAT CATCCCTCCA AAAGTGCTTT GAAGACTTGG AGTACTCGTA TCTTCTGGAC CGAGCATATG AACATGGAAA ATCTGGGAAT GGTCTCTTAA GAGCCTTAAA TGTTGCTGCT TTTGCCGTCT CTGGATACGC TTCCACTGAA GGCAGGCACT GTAAGCCCTT CAATCCTTTG CTTGGAGAAA CCTATGAAGC CGACTTTCCT GAAAAGGGGA TTCGTCAGTC ACCATCCAAC TGTTATCCGC CCTGCCACTG TGAAGGGAAA GGGTGGAAGT TCTGGGGTGA CACTAACCTC AGGTCAAAGT TTTGGGGGAG GTCGATTCAA GTCGAACCTG TCGGAGTTTT GACTCTAGAG TTTGATGATG GCGAAGTGTT TCAATGGAGC AAGGTAACAT CAACTATATA CAATATCATA CTAGGTAAAC TCTACTGTGA TCATCATGGT GTGATGCAAA TCCGTGGGAA CCGCCAATAT TCTTGTACGC TCAAGTTTAA GGAGCAATCC ATTCTTGAGA GAAACCCCCA CCAAGTAAAC GGTTTTGTAG AAGACGTAGC TGGGCAAAAA GTGGCAACAA TATTTGGTAA ATGGGATGAT AGTCTTTACT ATGTTGCCGG TGATGGAATC AGCAAGTCGA AAGTCAGTGA TCCCGCATCA AATGCGTCGT TACTGTGGAA AAGGACCAGG CCACCGCCTA ATGTCACTAG ATACAACTTA ACCTCATTTG CCATTACCCT AAACGAGTTA ACACCTGGTT TACAGGAGAT ACTTCCTCCT ACAGATTCTA GGCTCAGACC AGATCAACGG CATCTTGAGA ATGGTGAATA TGAGAAGGCG AACTTAGAAA AACAACGGTT AGAAAGAAGG CAAAGAATGT CGCGGCAACT TCAGGAAAGC GGATGGAGAC CGAGATGGTT TGAGAGACAA GGTGAAAGCG AAACATTCAA GTACACGGGT GGTTACTGGG AAGCACGAGG GCACAGAAAC TGGGATGATT GCCCCGACAT ATTCGGGGAG TTCACAGAAG AGCTAGCGGA TTCCGCTTAG AAAGCTTCTT GATTTCATTC CAGAAGATCT CCATCCGGAC CACAATGGAG TTGTTTACAC GGAAGCACAC GTCTTTGGAC CATGGTTGTG TCTTAGAGAG TCACTGTAAA GTCTTATCTC CTTCTCTTCA ATTCTCTATC TCCCTCGTTA AATAGTTGAG ATTAATGTAG GTTGGTCTTA CATTTGGACG AGTTCATTGT AATCCATTTG TATTTAATTA AAAAAAAA 
Length2598
Protein Sequence
Protein Residue
Map Locationscaffold_7: 8036742.. 8042877
Download Sequence
A.thaliana
AGI-codeAT4G22540.1
DescriptionOSBP(oxysterol binding protein)-related protein 2A
TAIR curator summary
Alias[ORP2A][OSBP(oxysterol binding protein)-related protein 2A]
Gene coexpression
MR
MR Locus Description
4.47214 Ahg478409 alpha-L-arabinofuranosidase 1
12.49 Ahg888770 F-box family protein
14.8324 Ahg888526 chloride channel E
30.1662 Ahg950867 U5 small nuclear ribonucleoprotein helicase
32.8634 Ahg494436 Protein of unknown function (DUF594)
33.3167 Ahg472532 Protein kinase family protein with ARM repeat domain
37.229 Ahg482131 CVP2 like 1
37.2559 Ahg895886 Protein kinase superfamily protein
45.5192 Ahg483691 WD-40 repeat family protein / beige-related
45.7493 Ahg488153 Auxin-responsive GH3 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression