Detail



ID : Ahg492772

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492772|fgenesh2_kg.7__2205__AT4G21150.1
Sequence
TCCTAGGCTT ACCTCAAACC TCAGTCTCCG TTGACTACTG AGACTCGTCG ACCTCTGATC CGATTCGATC TACTTCCGAT CTTGATGATG GCCGGAGGTG GCGTACGATT TCTGGTGTTG ATACTCGTTG TAGCAATTTG CGGTGCTGCT TCTGTTTTCC AGCCGATCTC AGACTCTCAC CGATCTGCGG CTGTGGATGT CTTCGTACCA GTCGATGGAT CATACAAAAG CTTGGATGAG GCATATGAAG CATTAAAGAC TTTGGAGATT CTTGGAATTG ATAAAAAGTC TGATTTTAGC TCATCGACTT GTGAGAATGT CGTTAAAGTT CTTGGGTCGT CTTCTTCTAC TCTTAAGGAT GCATTTTATG CGTTAAACAT TAATGGGATT CTGAAATGTA AAATTGGTGA AGCTGGTCCT AAGGACATTG TTTCTCAACT TCAAGCTGGT GTTAAAGATG CCAAGTTATT GCTTGACTTC TATTATTCTG TCAGAGGCTT GGTGCTGGTT AAGGAGCAAT TTCCTGGAGC TGATATAAGT CTTGGAGATG CTGAAGCCAT TTTTCGTTCC ATCAAGGCTC TTAGCCAAAG TGATGGAAGA TGGCGCTATA GCTCCAGCAA TCCAGAATCA AGCACCTTTG CTGCTGGCTT AGCCTACGAA ACGCTTGCTG GAGTGATTTC ATTAGCACCT TCAGAGCTTG ATCCATCTTT GATCCAGACG TTGAAGAAGG GTATCCTGAA GCTATTTGAC AGTATCCAAA AATTTGGTAT GCACGATGGG ACATTTTACT TCGATGAGAA GTCTGTTGAT GCAAGTCAAG GCCCGATCTC AACAACTGCA TCAGTAATTA GAGGGCTCAC GTCATTTGCA GCTTCAGAAT CCACAGGATT GAACCTTCCA GGTGATAAGA TAGTTGGTCT GGCCAAATTC TTTCTGGGTG TTGGAATTCC TGGTGATGCC AAGGACTTCT TCAACCAAAT AGATGCACTA GCTTGTTTGG AAGACAACAA GTTTTCTGTC CCACTCATCT TGTCTCTTCC ATCTACTGTC ATTTCATTGA CAAAGAAAGA GCCTCTGAAG GTTAAAGTGA GCACTGTACT GGGTTCGAAG GCACCAGCTC TTAGTGTGAA GCTCACACAA GCTCTAAGTT CTAAATCAGT GGATTCGTCT GTAATAAATA ACCAGGAGCT TAAGTTTGAC TCTGACAGTG CAACGTACTT CCTGGACTCC TTTCCCAAGA ACTTTGACGT TGGAAAATAT ACATTTGTAT TTGAGATTTT AGTGGATGAT TCAGCACATG AGAAAGTATA CATAACCGAA GCTCAAACAA AAGTGCCTGT AGCTGCCATA GGAGTTATTG GCATTGAAAA TGCAGAAATT GCTGTACTTG ACAGTGACAT TGGGAGCGTT GAATCTCAGA AAAAGCTAGA TTTAACTAAA GATGGAGAGG TATCATTATC AGCAAACCAC CTTCAAAAGC TACGCCTGTC GTTCCAGTTA ACTACTCCAC TTGGCAATTC GTTTAAGCCA CACCAGGCAT TTTTCAAGCT GAAACATGAG TCACAGGTCG AGCATATCTA TCTCGTGAAA ACTTCTGGAA AGAAGTCTGA ATTAGTTCTA GATTTTCTTG GATTGGTTGA GAAGCTCTAC TACCTCTCTG GTAAATATGA GATCCAGCTA ACTATTGGGG ATGCTTCTAT GGAGAACTCT TTACTGAGTA ATATTGGCCA CATCGAACTA GACCTACCAG AGCGTCCAGA GAAGGCGCCT CGTCCTCCTC TACAATCTAC TGAACCTTAC TCAAGATATG GGCCAAAAGC TGAAATATCA CACATATTCA GGATTCCTGA AAAGCTTCCA GCAAAGCAGC TCTCACTAGT TTTCTTGGGT GTTATCGTCC TCCCATTCAT CGGTTTCCTG ATAGGGCTTA CGCGGTTGGG AGTGAACATA AAGAGCTTCC CATCGTCGAC TGGATCTGCA ATATCGGCTT TACTTTTCCA CGGCGGAATT GGAGCTGTTT TGCTTCTCTA TGTGCTTTTC TGGTTAAAGT TGGATCTGTT CACGACTCTC AAGGCACTTT CTTTGTTGGG AGTGTTTCTG TTGTTCGTCG GACACAGAAC ACTATCTCAG CTCGCAGCAG CATCGAACAA GTTGAAATCT GCTTGAAGAA GAGAAATTCG TTATGACGGA TCTTTTTTTT TGGTTTATGC GTATTTCAGT TTTGTAGTGT TGCTTATATA GATTATGGTG ATAGACAAAT TCAAAAGCTC TCAGTTTAGT CTTAAAA 
Length2287
Protein Sequence
Protein Residue
Map Locationscaffold_7: 8822601.. 8827950
Download Sequence
A.thaliana
AGI-codeAT4G21150.1
Descriptionribophorin II (RPN2) family protein
TAIR curator summary
Alias[HAP6][RPN2][HAPLESS 6][RIBOPHORIN II]
Gene coexpression
MR
MR Locus Description
16.8819 Ahg472714 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
18.6815 Ahg495959 Ribosomal protein S4 (RPS4A) family protein
25.02 Ahg482410 Ribosomal protein L18ae/LX family protein
29.0345 Ahg347994 breast basic conserved 1
32.8634 Ahg929419 ATP binding microtubule motor family protein
35.2846 Ahg491293 Ribosomal protein S14p/S29e family protein
36.3318 Ahg491188 Ribosomal protein S3Ae
39.4208 Ahg491817 Ribosomal L28e protein family
42.9884 Ahg483355 general regulatory factor 9
46.0435 Ahg490823 mitochondrial heat shock protein 70-1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression