Detail



ID : Ahg929419

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929419|scaffold_301876.1
Sequence
CTCCGATTCG AGCTAGAGGC AATGAACGGA AGACAGAGAT CTGGCGCAGC GGCGGTGCAC CACCAGAGAC AGCTTTCCGA TAACCCTCTC GACATGTCTT CCTCCAATGG CCGATGGCTT CAATCTACTG GTCTTCAGCA TTTTCAGTCA TCCGCCAATG ATTATGGATA CTATGCTGGT GGACAAGGAG GTGGTCAAGC AGCAAGAGGT TACCAGAATG CTCAGAGAGG GTTTAATGGA GGGAATGAGT TTTTTGGGGA ACAACCAACT ACTCCTCAAT ACGGTGCTCG TCCAACGAAC CAAAGGAAGA ACAATGATGA ATCTGAGTTT AGTCCTGGGC TCTTAGATCT GCATTCTTTT GATACTGAGC TTCTTCCTGA GATTCCAGTC TCTAGCCAAG TAGATGGCCC CTCACTTTTC AATCCTAGTC AAGGCCAAAG CTTTGATGAC TTTGAAGCTT ACAACAAGCA GCCTAACCGT AGTCGCGTGT TGGCTGAAAA CTTGGCTGCT GAGAAGGAGA GGATGAATGC TGTTGCAAAG ATTAAAGTCG TTGTGCGTAA GCGACCACTT AACAAAAAGG AGTCGACAAA AAACGAGGAA GACATTGTTG ACACCCATGC CAATTGCTTA ACAGTTCATG AAACTAAACT TAAGGTTGAC TTAACAGCTT ATGTTGAAAA GCATGAATTT GTGTTTGATG CCGTGCTAGA TGAGGAAGTA TCAAATGATG AGGTATATCG TGAGACTGTG GAGCCTGTAG TCCCCCTAAT ATTTCAGCGC ATCAAAGCCA CTTGCTTTGC ATATGGGCAA ACAGGTAGTG GTAAAACCTA TACTATGAAG CCTTTGCCTC TTAAGGCTTC AAGGGACATT TTGAGGTTGA TGCACCACAC ATACAGAAAC CAAGGGTTTC AGTTGTTTGT TAGCTTCTTT GAGATTTATG GAGGAAAGCT GTATGATCTC CTCAGTGAGA GGAAGAAGCT GTGCATGAGA GAGGATGGTA AGCAGCAAGT GTGCATCGTT GGTTTACAAG AGTACAGAGT ATCTGATACA GATGCTATTA TGGAGCTTAT TGAGAGAGGA AGTGCAACAA GAAGTACTGG AACCACTGGT GCAAATGAAG AATCCTCTCG TTCACATGCT ATACTACAGC TCGCAATCAA AAAATCAGTA GAGGGAAATC AGTCAAAGCC CCCTCGCCTC GTTGGCAAGC TTTCTTTCAT TGATCTTGCT GGAAGTGAAC GTGGTGCAGA TACAACAGAC AATGACAAGC AGACAAGATT GGAAGGAGCA GAGATCAATA AGAGCTTACT CGCCTTAAAG GAATGCATCA GAGCTCTGGA TAATGATCAA GGTCACATCC CTTTTAGAGG CAGTAAGTTA ACCGAAGTTC TTAGGGACTC ATTCATGGGA AATTCTCGTA CTGTAATGAT ATCATGCATA TCTCCAAGCT CTGGATCATG TGAGCACACC CTTAACACCT TAAGATATGC GGACAGGGTT AAGAGTCTCT CAAAGGGAAA CGCCTCTAAG AAAGATGTAT CTTCTTCGTC CATGAACCTA AGGGAGTCCA CAAAAATTCC TTTGTCTTCT GCACTTCCAA CTCCATCTAA CTATGATGAT GACGTGAATG AGATGTGGAC TGAAGAGAAC GATGAATTTG ATGCATCGGA TTATGAGCAA GATAAACAAA TGTGGAAGAA AAACGGGAAG CTAGAGCCAT CCTATAACGG TATGGCACAG GAGAGAATCC CAAAACCTAT TATTCAGATG AAGTCAAGAG ACATGCCAAG GCCCGATATG AAGAAGTCAA ACTCCGATGA CAATCTAAAT GCACTTCTGC AGGAAGAAGA AGACCTTGTG AATGCACACC GTAAACAAGT TGAGGATACG ATGAACATTG TGAAAGAGGA GATGAACTTA CTGGTTGAAG CGGACCAACC TGGAAACCAG CTAGATGGTT ACATTTCAAG ACTGAACACA ATTCTATCTC AGAAGGCTGC AGGTATACTC CAACTACAGA ACCGTCTTGC TCATTTCCAG AAACGCCTTA GAGAGCACAA CGTATTGGTA TCTACCACTG GGTACTGACC TATAATCACT CTCTCGAGTA 
Length2110
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6386759.. 6390587
Download Sequence
A.thaliana
AGI-codeAT3G16060.1
DescriptionATP binding microtubule motor family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.73205 Ahg472969 U2 snRNP auxiliary factor small subunit, putative
2.44949 Ahg313480
10.9545 Ahg473141 SecY protein transport family protein
13.2665 Ahg929675 nuclear RNA polymerase D2B
13.4164 Ahg936457 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
13.4164 Ahg474563 carbon-nitrogen hydrolase family protein
14.4568 Ahg480978 Basic-leucine zipper (bZIP) transcription factor family protein
21.0713 Ahg949102 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein
21.5639 Ahg496103 VIRE2 interacting protein 2
23.8747 Ahg470624 SKP1/ASK-interacting protein 16
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression