Detail



ID : Ahg493066

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493066|fgenesh2_kg.7__2499__AT4G18040.1
Sequence
ACGAGTGGAA ATACATTAGT TTGGAGAAGA GAAACAGAGA GGAAGAGAGA GAGACACAGA GAGGCAGTTC TGAGAAACAA TGGCGGTAGA AGACACTCCC AAATCTGTTG TTACGGAAGA AGCAAACCCT AATTCTATAG AGAATCCGAT TGATCGATAC CATGAGGAAG GTGATGATGC CGAAGAAGGA GAGATCGTCG GAGGTGAAGG AGACGGAAAC GTTGACGAAT CGAGCAAATC CGCTGTTCCT CAATCGCATC CTTTGGAACA TTCATGGACT TTCTGGTTCG ACAATCCTTC TGTGAAATCG AAGCAAACCA CTTGGGGAAT TTCCTTGCGA CCGGTGTTTA CGTTTTCAAC TGTTGAGGAA TTTTGGAGTT TGTACAATAA CTTGAGGCAT CCGAACAAGT TAGTTCAAGG AGCTGACTTC TACTGTTTCA AACACAATAT CGAACCTAAG TGGGAGGATC CTATTTGTGC AAATGGAGGC AAATGGACTA TGTCTTTCCC TAAGGAGAAG TCTGATAAGA GCTGGCTCTA CACTTTGCTT GCTTTGATTG GAGAACAGTT CGATCATGGA GATGAAATAT GTGGAGCAGT TGTTAACATT AGAGGAAAGC AAGACAGAAT ATCCATTTGG ACCAAAAACG CTTCAAACGA AGCTGCTCAG GTGAGCATTG GAAAGCAATG GAAGGAGTTT CTGGATTACA ACAACAGCAT AGGTTTCATC ATCCATGAGG ATGCGAAGAA GCTCGACAGG AATGCAAGGA ACGTTTACAC TGCTTGAAAC CTCTCAAATC TTTGCATTGT TTCAATTACA GTTTTGTATG TGAGAGATCT CTATTTATAT CATCGAAACA TGACTTGACA CACTGTCTTT GCTCGTGAGT GTTGATTGTT CACAAGCTCT GACATTTCAC TTAGTAATAT ATTAGTATGG TC 
Length942
Protein Sequence
Protein Residue
Map Locationscaffold_7: 10360684.. 10362361
Download Sequence
A.thaliana
AGI-codeAT4G18040.1
Descriptioneukaryotic translation initiation factor 4E
TAIR curator summaryeIF4E protein. The cum1 mutation affects the local spreading of CMV within the inoculated leaf, delaying accumulation of cucumber mosaic virus coat protein.
Alias[AT.EIF4E1][CUM1][EIF4E][eIF4E1][ARABIDOPSIS THALIANA EUKARYOTIC TRANSLATION INITATION FACTOR 4E1][CUCUMOVIRUS MULTIPLICATION 1][eukaryotic translation initiation factor 4E][eukaryotic translation Initiation Factor 4E1]
Gene coexpression
MR
MR Locus Description
11.4891 Ahg313639 nuclear RNA polymerase A2
12.9615 Ahg472931 Ribosome associated membrane protein RAMP4
14.6287 Ahg470695 P-loop containing nucleoside triphosphate hydrolases superfamily protein
22.4499 Ahg932706 Mitochondrial substrate carrier family protein
23.9165 Ahg495917 RNA-binding (RRM/RBD/RNP motifs) family protein
24 Ahg949638 nucleotide binding protein 35
29.3939 Ahg336036
29.4618 Ahg949921 myosin heavy chain-related
33.1662 Ahg488863 staurosporin and temperature sensitive 3-like A
33.1964 Ahg484728 O-fucosyltransferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression