Detail



ID : Ahg495917

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495917|fgenesh2_kg.8__1733__AT5G58130.1
Sequence
AAAACTGAAT CCAACTGAAG CAGCAATGGA GGAAAAAAGC AGCAGCGGCG GCGGCGTTAG GCTTCACGTC GGCGGATTGG GAGAAAGCGT CGGGAGAGAT GATCTTCTCA AGATCTTTTC TCCGATGGGT ACCGTCGATG CCGTCGAATT CGTCAGGACC AAAGGTCGTT CCTTTGCCTA CATCGACTTC TCTCCCTCCT CTACCAATTC CCTCACCAAG CTCTTCTCCA CGTATAATGG ATGTGTGTGG AAAGGAGGGA GGCTACGACT GGAGAAAGCA AAAGAGCATT ATCTGGCTCG CTTGAAGCGA GAGTGGGAGG CAGCGTCTTC TACCTCTGAT AACACCATTA AAGCTCCCTC CGATTCAACA CCTTCCACCC ACCTTAACAT CTTCTTTCCC AGACTCAGAA AGGTGAAACC TATGCCACTT AGTGGAACTG GTAAACATAA GTATAGCTTT CAGCGTGTTC CACTGTCGTC TTCTCTTCCA AAGAGCTTTT GTGATTGTGA AGAGCACTCT AACAACTCTC TCACTCCTCG GGAAACACAT CTTCATGATC TGGAAGCGCT TAATGTGGGA AGAAATGAAG ACGAGGTGAA TGTTATGAAT TCGGTGATGA ATAAGCTCTT TGAGAAAAAC AACATTCCAA TCACCGAAGA AGACAATGAG ATTGAAGCAG ACCAAGATAA CCTCATCATC AATGTGGCAT CTAGTGGGAA CGATATGGAC TCAGAGCTGG ATAAGTTGTC TAGAAAACGG AAATCAATTC TCAACGAAAC AGCACCAAGT GGAGAAGGAT ATAGTGAAGG ACGAAAAGGG AACCACATTC ATCCAAGTAA GAAAAGGCAA ACAATCAGCC TAGAGGAAAG TGGGAGACAG GAATCTTTAC AGGCCATACG TGAAAAGAAG AAGCCTTCTA AAGTGGTACC GGATAAATCA TTGGATGAAC CGAGCAGAAC AACAGACGTC AAGCAGTCGA TCGACAATAT TTCCTGGTCC CAAAAGTCTT CCTGGAAATC ACTAATGGCC AATGGAAACA GCAGTGATTT TAGTGTATCC AGTTTCTTGC CAGGTGTTGG CTCAAGTAAA GCAGTACAAC CTGCACCACG CAACGCTGAT CTTGCTGAGC TTCGTAGCCG AGAAAATTCG AAGGAAAAGA CGAAAAGAAA GCGCGTAACT TCTACGATCA TGGCAGGGGA TTTACCTGTG CCAGATGACA TAAAGAGGGA TGATAGTGAC ACTATGGTAG ATGACATAGA GAGGGATGTT AGTGCTGCTG TGGAAGATGA CGCAGCTAGT GACTCTATGG CTGAGAGCGA TGATAGTGAT GCTGTGGAAT ATGACACAGC TATTGACTCT ATGGCTGATG ACACAGCTAG TGACTCTATG GCAGATGATG CAGCTAGTGA CGCTGTGGCT GAGAGCGATG ATAGTGATGC TGTGGAATAT GACACAGCTA TTGACTCTAT GGCAGATGAC ACAGCTAGTG ACTCTGTGGC AGATGACACA GCAAATGACG ATGTAGGTTC AGACGACTCA GAGTCACTTG CAGATACTGT TATTGACACA AGTGTTGACG CTGTACCCCT GGAATTTGTT GCAAACACCG AGGGCGATAG TGGGAACGGC AAGTCGAATG TGGAAACGCA TGAAAATGGA GTAGAGGATA TGAATGCGGA AAAGGAAAGC TTAGTTGTGA AGGAAAATGT TGTAGACGAA GAACAGGCAG GGAAAGGACC GGTGAAAGCT TGTAACAAGT CAACAGGAGG TTCTTCATGG CTTCAGAAGG CTTCATGGAC TCAGCTGGTT AGCGACAAAA ATACTTCTTC ATTCAGTATA ACTCAACTCT TCCCAGATTT AAGTTCTGAC AAGGGCGAAC CAGCTGGAGT GATCAACAGT GTAGAACGCC AGTCTCACAA GACTGCAAGT GCAATGAAGC AAACAGATTA CACATGTAGC AGTGGTGGTT TCGTGGCTGC GGGAGTCCCT GTGTGTAGTA CCCCTGTGAG AAGTTTAGAT GAGAATCGGC AGCGTCTTAA TGGTAAGAAT TTGAGTGAAG GAGCTAGATT GGGTGCGAAG AAGATAATTA AGAGAAAGGT TGGGTCGGGG GATACTTGCA CATTTATGAG AAGCTCGACT TCTTTGAAAG AGTGGGCAAA GGCTAAGAAG GCATTGAGTG AGCCTAGGAG AAAGAAAAAT GGTGAAGACT GAGTTAGATT GTAATAAGAT GAGAGGCTCT TCAAATTATG TATTCCTCTA CAATTTTTG 
Length2269
Protein Sequence
Protein Residue
Map Locationscaffold_8: 17319822.. 17322386
Download Sequence
A.thaliana
AGI-codeAT5G58130.1
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
TAIR curator summaryEncodes ROS3 (repressor of silencing 3), a RNA-binding protein required for DNA demethylation.
Alias[ROS3][REPRESSOR OF SILENCING 3]
Gene coexpression
MR
MR Locus Description
5.09902 Ahg488483 Vps51/Vps67 family (components of vesicular transport) protein
5.47723 Ahg489218 XS domain-containing protein / XS zinc finger domain-containing protein-related
11.8743 Ahg488863 staurosporin and temperature sensitive 3-like A
16.7332 Ahg479178 Protein phosphatase 2C family protein
20.347 Ahg937735 SER/ARG-rich protein 34A
23.9165 Ahg493066 eukaryotic translation initiation factor 4E
25.0998 Ahg493723 Translation initiation factor eIF3 subunit
25.4755 Ahg926990 Thioredoxin superfamily protein
25.9808 Ahg927340 mercaptopyruvate sulfurtransferase 1
28.5657 Ahg476982
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression