Detail



ID : Ahg493157

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493157|fgenesh2_kg.7__2590__AT4G17190.1
Sequence
ATCTTATCAA TGGCGGATCT GAAATCAACC TTCCTCGACG TTTACTCTAT TCTCAAGTCT GATCTGCTTC AAGATCCTTC CTTTGAATTC ACCCACGAGT CTCGTCAATG GCTTGAACGG ATGCTTGACT ACAATGTACG TGGCGGGAAG CTTAATCGTG GTCTCTCTGT GGTTGATAGC TACAAGCTCT TGAAGCAAGG CCAAGACTTG ACGGAGAAAG AGACTTTCCT CTCGTGTGCT CTCGGGTGGT GCATTGAATG GCTTCAAGCT TATTTCCTTG TGCTTGATGA CATCATGGAC AACTCTGTCA CACGCCGTGG CCAGCCTTGT TGGTTTAGAA AGCCAAAGGT TGGTATGATT GCCATTAACG ATGGGATTCT ACTTCGCAAT CATATCCACA GGATTCTCAA AAAACACTTC AGGGAAATGC CTTACTATGT TGACCTTGTT GATTTGTTTA ACGAGGTAGA GTTTCAAACA GCTTGTGGCC AGATGATTGA TTTGATCACT ACCTTTGATG GAGAAAAAGA TTTGTCTAAG TACTCCTTGC AAATCCATCG GCGTATTGTC CAGTACAAAA CAGCTTATTA CTCATTTTAT CTTCCTGTTG CTTGTGCATT GCTTATGGCG GGAGAAAATT TGGAAAACCA TACTGATGTG AAGAATGTTC TTGTTGACAT GGGAATTTAC TTTCAAGTAC AGGATGATTA TCTGGATTGT TTTGCTGATC CCGAGACACT TGGCAAGATA GGGACAGACA TAGAGGATTT CAAATGCTCC TGGTTGGTGG TTAAGGCATT GGAACGCTGC AATGAAGAAC AAACTAAGAT ATTATACGAG AACTATGGTA AAGCCGAACC ATCAAACGTT GCTAAGGTGA AAGCTCTCTA CAAAGAGCTT GATCTCGAGG GAGCGTTCAT GGAATATGAG AAGGAAAGCT ATGAGAAGCT GACAAAGTTG ATCGAAGCTC ACCAGAGTAA AGCAATTCAA GCAGTGCTAA AATCTTTCTT GGCTAAGATC TACAAGAGGC AGAAGTAGAG ACCTACTCTG GCTTCTCTCC GTTTAATTCT TCTGACATTT ATGTATTGTT TCATGACCTC TTTTGCGAAT TTGAGATTCT TGTTGATGCT T 
Length1131
Protein Sequence
Protein Residue
Map Locationscaffold_7: 10863109.. 10865361
Download Sequence
A.thaliana
AGI-codeAT4G17190.1
Descriptionfarnesyl diphosphate synthase 2
TAIR curator summaryEncodes a protein with farnesyl diphosphate synthase activity, which catalyzes the rate limiting step in isoprenoid biosynthesis. Its mRNA is most abundantly expressed in flowers.
Alias[FPS2][farnesyl diphosphate synthase 2]
Gene coexpression
MR
MR Locus Description
20.9284 Ahg480276 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
29.3598 Ahg941617 germin 3
34.8999 Ahg471076 Eukaryotic aspartyl protease family protein
36.8239 Ahg495241 subtilase 1.3
43.3705 Ahg951294 cell wall / vacuolar inhibitor of fructosidase 2
45.4753 Ahg335142 IQ-domain 30
48.4974 Ahg932181 Lipase/lipooxygenase, PLAT/LH2 family protein
50.7543 Ahg471009 Histone superfamily protein
50.9411 Ahg480193 O-Glycosyl hydrolases family 17 protein
53.2165 Ahg472662 MLP-like protein 423
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression