Detail



ID : Ahg493218

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493218|fgenesh2_kg.7__2651__AT4G16580.1
Sequence
TTCTTTCGTG CAATTTGTGA TCTCTTCTTT CAGAAAATTT TCTGGATTCT AGCCAATTTC TCTTGTGACT TAGAACACAT TATCTTCTCC GGAGGGTTGT GAAAAAAGAG ACGTTTTTGG TCCTGGTAAG TTCCGAATTC GTCTTTGTTT GAGCTCTGAG TTTTAAGGGT TTGTGTTCGA TCAATCTTTA GATCGTTGGT GAAAAGTGTT TAAATCGACG AAAGAAGTGA TGCTTTGGAA GATATGATCT TCTCTATCTC TGGTTATTAC TGGGTTTCGA GATTGTGCTG CTTAAGATGT TACCTGTGAG AGAAGGTCTT CAGAAACAAG TTAAGATTTT GATTGGCTTA GGGAATTTAG GGTTTGGTGG TTATAGAGGA TTGCACTCTA GATTTACTAA CCCTAACGGG TTTTTAGAAC CTGCGAGCTC TGATTTGTTG TTGATTAACG AAAGGAGGAA CCTTTCTGTT GTTGGTGCTG TTTCTCGAAC TTTCTCTGTT CCTTCAGTAT CTGGTCCAGC CTTTCAGGTT TGTGGATATC ATATTGATCT TTTGCTTTCG GATCCGTGTA AATCAATGGC AAGTTTAGGT TCTAAATCTT TGTTTGTGGA TCGTCGTTGT GATTCTCTTG TTTCAAAGCG TTTCACTGGT GGTATGGTAT CTGGAGATGG TCTTAACCGT GGAAGAATCA GTATGAGACT CAGAGGAAAA GATCACCAGG AGAAGTCTAC GATCTATGCA TATTTTGCTT ATAGAGGTGC GAAGAGATGG ATTTATTTGA ATCAGCAAAG AAGAGGAATG GGATTTAGAG GCTTGCATAG CTCACTATCT AATCGCTTAT CAGCTGGGAA TGCGCCTGAT GTCTCTTTAG ATAACTCTGT CACTGAAGAA CAGGTTAGAG ATTCTTCGGA TTCTGTAGCG GATAAGCTAT GTACTAAGCC CCTGAAGCTT GTCTCGGGGT CGTGTTATCT ACCGCATCCT GATAAAGAGG CGACTGGGGG AGAAGATGCT CACTTTATCT GTGCAGAGGA GCAAGCATTG GGTGTGGCAG ATGGTGTGGG AGGTTGGGCG GAGCTCGGTA TTGATGCAGG TTACTATTCT CGGGAGCTTA TGTCTAACTC AGTGAATGCA ATCCAAGACG AGCCTAAAGG TTCGATTGAT CCAGCCAGAG TATTGGAAAA AGCTCATACT TGCACAAAGT CACAAGGGTC TTCAACAGCT TGCATCATAG CCTTAACCAA CCAGGGACTT CATGCAATCA ACTTAGGCGA CAGCGGGTTC ATGGTTGTCC GTGAAGGGCA CACGGTTTTC CGTTCCCCCG TTCAACAGCA TGACTTCAAC TTCACCTATC AGCTGGAGAG TGGAAGAAAT GGTGATTTGC CAAGCTCAGG TCAGGTTTTC ACTGTTGCTG TCGCTCCTGG AGATGTTATA ATAGCTGGAA CAGATGGATT ATTCGACAAC CTGTACAACA ACGAGATCAC AGCCATAGTG GTTCACGCTG TGAGAGCCAA CATAGATCCT CAGGTAACAG CACAGAAGAT TGCAGCATTG GCGCGACAAA GAGCACTGGA CAAAAACAGA CAAACTCCAT TCTCGACAGC AGCACAAGAT GCTGGCTTCA GATACTACGG AGGTAAGCTT GATGACATTA CAGTTGTTGT CTCTTATGTG GCGGCTTCGA AAGAAGAAGG AAAACATTGA TGAAGAGACA AATACAGATG TGTCATGTGT TGAGTTATAA AGTTTGTGTT TTGCAGAAAC CTCTCTTGTT TTGCTTAATG GTTTGTGAGC ATTCTCATCT GATTTTATTT GATTTTTTTG ATATATATGT AAATAAAAGA GAAAGAG 
Length1847
Protein Sequence
Protein Residue
Map Locationscaffold_7: 11193454.. 11195340
Download Sequence
A.thaliana
AGI-codeAT4G16580.1
DescriptionProtein phosphatase 2C family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
18.0555 Ahg487056 Protein kinase superfamily protein
20.1494 Ahg945737 Galactose mutarotase-like superfamily protein
25.9808 Ahg472467 phytochrome-associated protein phosphatase type 2C
29.1548 Ahg353623 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein
32.5423 Ahg478622 A20/AN1-like zinc finger family protein
33.4066 Ahg481396 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related
34.3366 Ahg487906 Peptidyl-tRNA hydrolase II (PTH2) family protein
40.398 Ahg487868 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related
40.398 Ahg320642 RNA binding (RRM/RBD/RNP motifs) family protein
45.8258 Ahg919825 protein phosphatase 2A-2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression