Detail



ID : Ahg478622

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478622|fgenesh2_kg.3__1323__AT3G12630.1
Sequence
CTATCTCTCT CTCCTCGAAA TCGATCCGTA AACTCGCCGG AGGGGCAGGG AGATTCAATA AGACGATGGC TCAGAGAACG GAGAAGGAAG AGACGGAGTT CAAAGTTCTT GAAACCTTGA CGACAACAAC AACAACGACG CTATGTACCA ATAACTGCGG CGTTACAGCG AATCCTTCGA CGAACAACAT GTGTCAGAAA TGTTTCAACG CATCTCTCGT CTCGGCGGCC GCCGGTGTTG TTGAATCAGG CTCGATCTTG AAGAGATCGG CGAGATCTGT CAATCTTCGG TCATCACCAG CTAAAGTCGT GATTCGTGCG AGAGAGATCG ATGCGGTGAA GAGAGATCAA CAGATCGTAA ACCGATGTTC TGGTTGTCGG AAGAAGGTTG GGTTGACCGG ATTCAGGTGC CGATGCGGTG AGCTTTTCTG CTCCGAGCAC CGTTACTCCG ATCGTCATGA TTGTAGCTAC GACTACAAAA CCGCCGGTCG TGAGGCGATC GCTAGGGAAA ATCCGGTGGT CAAGGCGGCG AAGATGGTCA AAGTTTAAAT TAAAATTCGA TCTCAACCGT TGAAAACTTG TGGTGGTTCG AAGCTCCGAT CTATACGATC GGAAGAGATG GTCGGAGACA TCGATTTGAA TTGGTGCTGT GTTGTAAAAG AAGATAAATC TGAACCTCCA ATTTTTATTT TTTTTACGTT TTTCATCTTT TAATTTATAT ATTAGTGAAT GATTATTATT ATTATTATTG TGTGGCTTAC GGATTCATGA ATTTGCCTCT TGATCATCGA GAAATGTGTA TGTAGGATAT GGTAGAAACG AAGGGGTGGA TTGGTAATTT AGGAACGTGT CTCTCTGGTT TCGTTCGTTT CGTGTGGTAG ATGTACTTAT CACGGATACT AGTCCATTGT GCGTCAC 
Length917
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4783718.. 4784634
Download Sequence
A.thaliana
AGI-codeAT3G12630.1
DescriptionA20/AN1-like zinc finger family protein
TAIR curator summary
Alias[SAP5][stress associated protein 5]
Gene coexpression
MR
MR Locus Description
2.23607 Ahg493564 ammonium transporter 1;1
5.47723 Ahg934359 PLAC8 family protein
6.7082 Ahg472658 Protein of unknown function (DUF626)
6.7082 Ahg477669 small and basic intrinsic protein 1A
8.94427 Ahg488055 Ubiquitin-associated/translation elongation factor EF1B protein
9.8995 Ahg484624 Oxoglutarate/iron-dependent oxygenase
10.0995 Ahg487868 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related
12.8062 Ahg479168 ubiquitin-conjugating enzyme 32
13.0384 Ahg494501 copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1)
14.9666 Ahg482870 RNA-binding KH domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression