Detail



ID : Ahg493658

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493658|fgenesh2_kg.7__3091__AT5G36170.2
Sequence
AAGGTCAGAA ATTTGAAGAA AAGCTTTGAG CAGAAGAATT GTCCATGGAG CTCACCGTTC TCGGACCTCT CGCCGGTCGG AGTTTTGCAA TCACCGCAAA ACACAAACTG CTGCTTCTTC GACCAACTAA TCTCCCTCTT CTCCGTCTCT CACTCCTGCT TCCTCCTCCC CAATTCTCTT CTTCTTCTTC TTTTGTTTCA GTAGTATTCG CTGCACAGGA GAGTAACCTG AGTGTATCGA ATGAAAATGA AACCAGTGAG TGGCTAATGC AAGATTTTTA TACATTGAGG AAAGATGTTG AAATAGCATC AGCTCGTGTT GAAGAGATTA GAGCATCTGC TGGTTTAGAG CAATTAGAAC AAGAGATTGC TAATTTGGAA TCAAAAGCTA CTGATACCTC TTTTTGGGAT GATCGTACTA AAGCTCAAGA AACGTTATCG GCTTTAAACG ATCTTAAAGA TCGGATGCGG TTGCTTTCTG AGTTCAAAAC CATGGTTGAA GATGCGGAAA CGATTGTTAA ACTAACGGAA GAGATGGACT CTACTGATGT TAGTTTACTT GAAGAAGCAA TGGGAATCAT CAAAGAGTTG AATAAATCTT TAGATCGATT TGAGCTAACT CAGCTTTTAT CAGGACCTTA TGACAAAGAA GGTGCTGTTG TCTACATTAC AGCCGGAGCT GGAGGAACAG ATGCACAGGA TTGGGCCGAT ATGCTGCTTA GGATGTATAT GAGATGGGGA GAGAAGCAAC GGTACAAGAC AAAAGTTGTT GAAATGTCTA ATGGAGAAGA GGCAGGGATT AAGTCAGCGA CCCTTGAAAT TGAAGGGCGT TATGCATATG GTTACATTTC AGGGGAGAAA GGAACTCATA GGATTGTTCG ACAATCACCA TTCAATTCGA AAGGTCTTCG GCAGACAAGC TTTTCTGGTG TGGAAGTGAT GCCGCTTCTG CCTGAGGAAG CAGTGGGAAT TGAAATACCA GAGGAAGACC TTGACATTAG TTTCACGAGG GCAGGTGGGA AAGGAGGACA GAATGTCAAC AAGGTTGAAA CTGCTGTTCG GATTACTCAC ATCCCTACTG GTGTTGCTGT CCGTTGCACA GAGGAGAGAA GTCAACTGGC GAACAAGACG AGAGCTCTGA TCAGACTAAA GGCGAAACTG TTGGTGATTG CGGAGGAGCA ACGTGCGACT GAAATCAAGG AAATAAGAGG AGATGCAGTG AAAGCTGAAT GGGGACAGCA GATTAGGAAC TACGTGTTTC ATCCGTACAA ACTGGTTAAG GATGTCCGAA CAGGTCATGA AACTTCTGAT ATCACATCTG TGATGGATGG TGACTTGGAT CCTTTCATCA AAGCTTACCT TAAGCATAAG TACACCTTAG CCATGGCTTC TGCTGTAACC AATTAGAATG TTGTTGATAG GCTTGTTCCT TCCTCCTAGA CTGTTCAATT TTACAGCATA ATCTTGAATT CCAACAGATA AGCTTAATGT GAGATTGTGA GTTATGTCTG TTTGTATCTA AATAAAACCG CATTTTGTTC TACACGAAAC GAAACATAAA ACTAATCATA ACCACTACCA AACCATAT 
Length1588
Protein Sequence
Protein Residue
Map Locationscaffold_7: 18237458.. 18239718
Download Sequence
A.thaliana
AGI-codeAT5G36170.1
Descriptionhigh chlorophyll fluorescent 109
TAIR curator summaryRequired for normal processing of polycistronic plastidial transcripts
Alias[ATPRFB][HCF109][high chlorophyll fluorescent 109]
Gene coexpression
MR
MR Locus Description
19.2614 Ahg929719 CRS1 / YhbY (CRM) domain-containing protein
19.4936 Ahg934121 Tetratricopeptide repeat (TPR)-like superfamily protein
31.1769 Ahg941384 tonneau 2 (TON2)
31.305 Ahg477686 plastid transcriptionally active 3
36.5513 Ahg950184 homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1
40.025 Ahg922337 Single hybrid motif superfamily protein
55.6507 Ahg478019 DEA(D/H)-box RNA helicase family protein
56.1249 Ahg932055 NAD(P)-binding Rossmann-fold superfamily protein
66.3626 Ahg932068
66.8132 Ahg902143 NADPH-dependent thioredoxin reductase C
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression