Detail



ID : Ahg902143

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|902143|Al_scaffold_0004_2793
Sequence
ATGGCTGCGT CTCCCAAGAT AGGCATCGGA ATTGCCTCCG TCTCCTCGTC TCACCGCGTC TCCGCCGCCT CATCCGCTCT TTCTCCTCCG TATCATCTCT TCTCTCTCAG CACTACTACT ACTACTACTA CACGTCACGG CGGCTCCTTC CTTCTCCGTC AACCAACCCG AACTCGCTCT TCCGATTCCC TCCGCCTCAG AGTCTCCGCC ACCGCCAATT CGACGTCTTC TTCTTCAGGA GCAGGCGAGA TTATCGAGAA TGTAGTGATT ATAGGCTCAG GTCCGGCCGG TTATACGGCG GCGATATATG CAGCGCGCGC CAATTTGAAG CCGGTGGTTT TTGAAGGGTA TCAGATGGGC GGAGTTCCCG GTGGACAGTT GATGACAACC ACTGAAGTTG AGAATTTTCC AGGATTCCCA GACGGTATTA CGGGGCCGGA TTTAATGGAG AAAATGAGAA AGCAAGCTGA GAGATGGGGA GCAGAGTTGT ATCCAGAAGA TGTTGAATCT CTTAATGTCA CAACTGCTCC TTTTACTGTG CAAACTAGTG AACGTAAGGT CAAGTGCCAT AGTATTATAT ATGCCACTGG AGCTACAGCA AGGAGGTTAA GGTTACCTCG AGAGGAAGAG TTCTGGAGTA GGGGGATAAG TGCTTGTGCA ATCTGTGATG GAGCTTCTCC TTTATTTAAG GGGCAAGTAC TTGCCGTGGT TGGAGGAGGA GATACGGCTA CAGAGGAAGC CTTGTACCTT ACGAAATATG CCCGTCATGT TCATTTGCTT GTTCGCAGAG ACCAGTTGAG AGCTTCCAAG GCTATGCAAG ATAGAGTGAT CAACAATCCA AACATCACAG TGCATTACAA CACGGAAACC GTGGACGTAT TGAGCAACAC CAAGGGACAG ATGTCTGGCA TTCTACTCAG AAGACTTGAT ACGGGTGAAG AAACCGAGCT GGAGGCAAAA GGATTGTTTT ATGGAATAGG GCATTCGCCA AACAGTCAGT TATTGGAAGG CCAAGTCGAA CTCGACAGCT CGGGGTACGT CTTGGTTCGG GAAGGAACAT CAAATACATC AGTTGAAGGC GTATTTGCTG CAGGAGATGT GCAGGACCAT GAATGGAGAC AAGCTGTAAC TGCTGCGGGA TCAGGATGCA TAGCTGCTTT GTCAGCCGAG AGATACCTCA CAAGTAACAA TCTTCTTGTT GAATTTCACC AGCCTCAAAC TGAAGAGGCC AAGAAAGAAT TCACACAACG CGATGTCCAA GAAAAGTTTG ACATCACTCT TACAAAGCAT AAGGGACAGT ATGCTCTTAG AAAATTATAC CATGAGAGTC CAAGAGTTAT ATTGGTACTA TACACTTCAC CAACGTGTGG CCCCTGTAGG ACTCTGAAGC CTATTTTGAA CAAGGTGGTC GATGAGTATA ACCATGATGT GCATTTTGTT GAGATTGACA TTGAGGAAGA TCAAGAAATT GCTGAAGCAG CTGGAATCAT GGGAACCCCA TGTGTGCAGT TCTTCAAGAA CAAGGAAATG CTCAGGACTA TATCGGGTGT GAAGATGAAG AAAGAGTACC GGGAATTCAT TGAGGCCAAT AAATGA 
Length1596
Protein Sequence
Protein Residue
Map Locationscaffold_4: 19352360.. 19355065
Download Sequence
A.thaliana
AGI-codeAT2G41680.1
DescriptionNADPH-dependent thioredoxin reductase C
TAIR curator summaryEncodes a NADPH thioredoxin reductase involved in chloroplast protection against oxidative damage.
Alias[NTRC][NADPH-dependent thioredoxin reductase C]
Gene coexpression
MR
MR Locus Description
4.24264 Ahg940745 dicarboxylate transporter 1
6.32456 Ahg495046 chloroplast heat shock protein 70-2
12.1244 Ahg494297 Mitochondrial substrate carrier family protein
13.7113 Ahg485688 Cytochrome P450 superfamily protein
14 Ahg482332 Ribosomal protein S5 family protein
14.0712 Ahg494320 pentatricopeptide (PPR) repeat-containing protein
14.8997 Ahg946346 P-loop containing nucleoside triphosphate hydrolases superfamily protein
16.1245 Ahg474606 chaperonin 60 beta
16.8523 Ahg482552 mitochondrial substrate carrier family protein
19.5959 Ahg489037 YGGT family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression