Detail


ID : Ahg493925

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493925|fgenesh2_kg.7__3358__AT5G40580.2
Sequence
TTATAGAGTG GTGAATCGGA AAATGACGCA CTCGTCCGTC GATTTACCGC CGAAAGGTGG GTTTAGCTTT GATCTGTGCA AAAGGAATGA TATGCTGACA CAGAAGGGTC TTAAAGCTCC GTCGTTTCTC AAGACTGGAA CAACTATTGT TGGGTTGATT TTCAAGGATG GTGTGATACT TGGGGCTGAT ACACGGGCAA CTGAAGGGCC TATTGTGGCT GATAAGAACT GTGAGAAGAT TCACTACATG GCACCAAACA TTTATTGTTG TGGTGCAGGA ACTGCTGCTG ACACTGAAGC AGTAACTGAT ATGGTCAGCT CACAGTTGCG GTTGCATAGA TACCAGACTG GCCGAGATTC TCGAGTCATT ACTGCATTGA CCCTTCTCAA AAAACATCTT TTCAGCTATC AAGGTCATGT CTCAGCTGCT CTTGTACTTG GTGGAGTTGA CATTACCGGG CCTCATCTGC ATACCATATA CCCACACGGT TCCACTGATA CTCTACCATT TGCTACAATG GGTTCTGGTT CCCTTGCTGC CATGTCAGTG TTTGAAGCAA AGTATAAAGA AGGTCTAACT AGAGACGAAG GAATCAAGTT GGTTGCTGAA GCCATATGCT CTGGTATATT TAACGACCTT GGTAGTGGTA GCAATGTGGA TATCTGTGTG ATCACTAAGG GGCACAAGGA ATACTTGAGG AATTACATGG AACCAAACCC AAGAACCTAT GTTAGCAGCA AAGGCTATTC ATTCACCAAG AAAACTGAGG TTCTACTCAC CAAAATTACA CCATTATCGG AGCGAGTCGA AATTGTAGAA GTGGCTGGTG AAGCTATGGA GGAATGAATC TCGTGTAAGA GACGACACTA AGAGTGAAAT CATTGTTCTA CTTCACATGA CAGTCATTTT CTACTTTGTT TAATTTTAAC GATTAAAATC GAATCTTAGT TGCTTTCATT TCAGTCTTTA GATTTGGCTT GAACTTATGA TTAATGGTTT TGAAATTTAG CTCTCGCATA ATTTTCAAAA GAG
Length1033
Protein Sequence
Protein Residue
Map Locationscaffold_7: 20815644.. 20817820
Download Sequence
A.thaliana
AGI-codeAT5G40580.1
Description20S proteasome beta subunit PBB2
TAIR curator summaryEncodes 20S proteasome beta subunit PBB2 (PBB2).
Alias[PBB2][20S proteasome beta subunit PBB2]
Gene coexpression
MR
MR Locus Description
2.23607 Ahg478846 20S proteasome alpha subunit E2
3.74166 Ahg946399 SH3 domain-containing protein
5.91608 Ahg496605
8.24621 Ahg910991 stress-inducible protein, putative
8.77496 Ahg487299 ubiquitin-conjugating enzyme 22
9.05539 Ahg933625 SHAGGY-related protein kinase dZeta
9.64365 Ahg485406 Transducin/WD40 repeat-like superfamily protein
13.0384 Ahg483365
15.0997 Ahg313324 Mediator complex, subunit Med10
15.4919 Ahg488476 RNA binding (RRM/RBD/RNP motifs) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression