| Annotation |
|---|
| Description | jgi|Araly1|494129|fgenesh2_kg.7__3562__AT5G38470.1 |
| Sequence |
CTCTCTCTAT ACTTTGCTTC TCTCTCTAAC CTTCTCTCTT TTTTTCTCTA AACGATGAAG ATTTTCGTGA AGACTCTCAG TGGTACGAAC TTCGAGATCG AAGTTAAACC TGCGGATACG GTTTCTGATG TTAAGAAAGC TATAGAAACT GTTAAAGGTG CAGAATACCC TGCTGTGAAG CAGATGCTGA TCCACCAAGG AAAGGTTCTA AAGGATGAGA CCACATTGGA AGAGAACAAT GTTGTTGAGA ACAGTTTCAT TGTTATCATG TTGTCCAAGA CCAAGGCTTC GTCAAGTGGG GCATCAACTG CATCTGCACC AGCACCTAGT GCTACCCAGG CACAGACAGT TGCTACACCT CAGGTTTCTG CTCCAACTGT CTCAGTTCCA GAGCCTACAA GTGGAACTGC AACCGCTGCA GCTCCAGCTG CTGCTGCTTC GGTTCAAACA GATGTGTATG GTCAAGCAGC GTCAAACCTT GTTGCTGGAA CTACTCTAGA GTCCACTGTT CAGCAAATTC TTGACATGGG TGGAGGTAGT TGGGACCGTG ACACTGTTGT TCGTGCTCTG AGAGCTGCCT TCAACAATCC TGAAAGAGCC GTTGAATATC TGTACTCAGG TATCCCTGCT CAAGCTGAAA TCCCGCCAGT TGCTCAAGCC CCATCTACTG GTGAACAGCC AGCAAATCCT CAAGCACAAC CCCAACAAGC AGCTCCGGTA GCTGCAACTG GTGGTCCAAA CGCAAATCCA TTAAACCTGT TCCCCCAGGG CATGCCCGCT GCAGATGCTG CTGCTGGAGC TGGTAATCTT GATTTCCTGC GTAACAGTCA GCAGTTCCAA GCCTTGCGAG CTATGGTACA AGCAAACCCA CAAATTCTAC AGCCTATGCT TCAGGAGCTC GGTAAACAAA ACCCGCAGCT TGTGCGACTA ATTCAAGAGC ACCAGGCTGA CTTCCTACGC TTGATAAATG AGCCCGTCGA GGGAGAAGAG AATGTTATGG AACAGTTGGA AGCAGCAATG CCACAAGCTG TTACAGTTAC ACCTGAAGAG CGTGAAGCCA TTGAACGGCT TGAAGCGATG GGGTTTGATC GTGCGATGGT CTTAGAAGTG TTCTTTGCGT GTAACAAGAA TGAAGAACTT GCAGCGAATT ACCTTCTAGA TCACATGCAT GAGTTTGAGG ACCAATAAAC AGAGCAAATC CATTCCTCCT CCCTAAACTC AGAGACCCAT CTTTCTGTTT CTTTTTCTTC TTCTTTTTAA TATGATAATC TCTTCTCCAA TGCCATTTGA CAGTTTCATG TTTATGTTCA TGGGAGTTGA TGTGTTTATG TTATACATTT AAAACTATCA TAGTTTATCT GGTTTGAAGA TGCTCCTCTT TT |
| Length | 1382 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 22467602.. 22470708 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G38470.1 |
| Description | Rad23 UV excision repair protein family |
| TAIR curator summary | Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome. |
| Alias | [RAD23D][RADIATION SENSITIVE23D] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg937016 | DNAJ homologue 3 |
| 3.87298 |
Ahg947784 | tRNA synthetase class I (I, L, M and V) family protein |
| 4.3589 |
Ahg473889 | succinate dehydrogenase 5 |
| 4.47214 |
Ahg483883 | squamosa promoter binding protein-like 1 |
| 4.47214 |
Ahg482367 | SecY protein transport family protein |
| 4.89898 |
Ahg497146 | Endomembrane protein 70 protein family |
| 7.14143 |
Ahg313117 | general regulatory factor 10 |
| 10.9545 |
Ahg484506 | Cytochrome C1 family |
| 12 |
Ahg483931 | fumarase 1 |
| 15.6525 |
Ahg496212 | PDI-like 1-4 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|