Detail



ID : Ahg483931

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483931|fgenesh2_kg.4__2991__AT2G47510.1
Sequence
TCTCTCTGTG CTCTTCTGCG ACTTGATCCG TCGTCTTCTC TCAACTCTCC ATCTTCGTCT TCCAAGTTTT ACTGTCAGGT AGAAGAAACC ATGGCGATTT ACGTTGCGTC GCGGCGGCTC TCCCGCGGAA CAACTGCGAC GGCGCTGCGT TATGCCACCT CGCTGAGATC TTATTCGACA TCGTTTAGGG AGGAGAGGGA TACCTTCGGG CCGATCCAAG TTCCTTCCGA TAAATTGTGG GGAGCCCAGA CGCAGAGGTC GCTGCAGAAC TTCGAAATCG GTGGTGAGCG CGAGCGAATG CCTGAACCAA TTGTCCGCGC TTTTGGAGTC TTGAAGAAAT GCGCTGCCAA GGTTAACATG GAGTATGGTC TTGATCCAAC GATTGGGAAA GCTATTATGC AAGCTGCTCA GGAAGTAGCT GAGGGAAAGC TCAATGATCA TTTCCCCCTT GTTGTCTGGC AGACTGGTAG TGGGACTCAG AGTAATATGA ATGCTAATGA GGTCATTGCT AACAGAGCAG CTGAGATTCT TGGTCGCAAA CGTGGTGAGA AATGTGTGCA CCCAAATGAC CATGTCAATA GATCACAATC TTCTAACGAC ACTTTTCCAA CCGTCATGCA CATTGCAGCT GCAACCGAGA TTAATTCGAG GCTCATCCCT AGTTTAAAAA CTTTGCATAG CACTTTGGAA TCTAAGTCCT TCGAGTTCAA AGATATTGTG AAAATTGGAA GAACTCACAC CCAAGATGCT ACACCTTTGA CACTAGGACA AGAATTTGGT GGCTATGCTA CTCAGGTTAA GTATGGACTA AATAGAGTCA CCTGCACTCT TCCTCGCCTC TATCAGCTTG CACAAGGTGG AACTGCGGTT GGGACAGGAT TAAACACTAA GAAAGGATTT GATGTAAAGA TAGCTGCTGC AGTAGCTGAA GAAACAAACT TGCCATTTGT CACCGCAGAA AACAAGTTTG AAGCTCTGGC TGCACATGAT GCTTGTGTTG AAACCAGTGG GTCACTTAAC ACAATCGCCA CATCGCTGAT GAAAATCGCC AATGATATAC GTTTTCTTGG AAGTGGCCCA AGATGTGGTC TTGGTGAACT TGTTCTACCT GAAAATGAGC CAGGAAGCAG TATCATGCCT GGGAAGGTAA ATCCTACACA GTGTGAGGCC TTGACTATGG TTTGTGCTCA GGTTATGGGA AACCATGTAG CTGTGACAGT TGGTGGGTCA AATGGTCATT TTGAATTGAA TGTATTCAAG CCGGTGATCG CAAGCGCTCT TTTGCATTCC GTCAGATTAA TAGCAGATGC TTCAGCTTCG TTCGAGAAAA ACTGTGTGAG GGGCATTGAG GCCAACAGAG AAAGGATCTC AAAGCTATTG CACGAGTCTC TTATGCTCGT GACATCATTG AATCCGAAAA TCGGCTATGA CAATGCTGCA GCAGTTGCCA AGAAAGCTCA CAAAGAAGGA TGTACATTGA AGGACGCGGC TCTGAAGCTA GGCGTTCTTA CTGCGGAAGA GTTTGATACT CTTGTTGTTC CTGAGAAGAT GATTGGTCCC TCCGATTGAT AGTTCTTTTT GGAGCCAAAG CTTCTTTATT TAGGTTATAA TAAAAATGAG CAAATCCGAC AAACTATATA ATTCAAATTT TCTTGGGAGG GCAACATCTA TCATCTTCTC TATGTATCAA TTTTTTTGTG TTGAATAAGA GTAAACTCAG CGAGAAGAAT GTCT 
Length1734
Protein Sequence
Protein Residue
Map Locationscaffold_4: 21893315.. 21897128
Download Sequence
A.thaliana
AGI-codeAT2G47510.1
Descriptionfumarase 1
TAIR curator summaryEncodes a mitochondrial-localized protein. The FUM1 gene appears to be essential, suggesting that FUM1 may play a crucial role as a fumarase in the tricarboxylic acid cycle.
Alias[FUM1][fumarase 1]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg487003 Ribonuclease II/R family protein
2.82843 Ahg474170 Ergosterol biosynthesis ERG4/ERG24 family
3 Ahg495090 Galactose oxidase/kelch repeat superfamily protein
3.87298 Ahg925035 Radical SAM superfamily protein
9.11043 Ahg478716 proteasome activating protein 200
12 Ahg494129 Rad23 UV excision repair protein family
12 Ahg940431 conserved peptide upstream open reading frame 21
12.0416 Ahg493493 Sec23/Sec24 protein transport family protein
12.9615 Ahg484144 Glutamine amidotransferase type 1 family protein
16.5227 Ahg923937 regulatory particle triple-A 1A
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression