| Annotation |
|---|
| Description | jgi|Araly1|494224|fgenesh2_kg.8__40__AT5G47480.1 |
| Sequence |
ATGGCTTCGA CTGCTGATTT CCTCCTGGAG GATCAAACGG ACGAGGATTT CTTCGACAAA CTTGTTGATG ATTCCTATAC TCCTACCGCT TCATCCTCTG CTAAGGAGCT GAAATTCGAC GACGGTAGTG ATTCCGATGA CGCCAGAGCT TTTGCTAATC TCTCCGTCGT TGACGATGTT GTGGGTGATG GAGATGTCGC ATTGAATGAA GCAGGTTTTG GGAACGATGT TGCAAACGAG GGTACTAGTG GTTCGGTGGG AAAAGAAGAG CCTTCTTCAT CTATTGCTCC GGAAGCTCTT CAATTTGTCA ACAGTGATGC AAATAAGTTA AGGGATGATG ATGATGTGGT GAGATCGGGG GTGGATGATA TGCCACTAAC TGAAACGGCA AAAGAAAGTA ATATAGTCGA TGGATCTGGG AGTCCTGGGG TTAAGGAGGT TGGTTGGGGC TCCTTTTATG CCGATTCATC TGTAAATGAC GGTCGTGGGT TTGGTTCATA CTCTGATTTC TTCACTGAGT TGGATGGAAC TGCAGGGGAT TTACAGGGAC AGGCCGAGGT AGCTGTGGCC ACTGGAGGCA ACTTAGTAGC CAATGCAACA AGTGTTGGTT TAGATAATTC GGCAGGGTTT GAGCAACACC ATGGTCAAGT GCAACACGAT TCTGGAAGCG GGCAGTATGT GGATAATAGT CAATCTTGGG AAAATCTCTA TCCTGGGTGG AAATATGATG CAAGTACTGG TCAATGGTAT CAAGTTGATG GTCATGATGC AAGCGTGAAT TCACAGGAGA GCTATACAAA CTCAACAAGT AACTGGGAAA GCGTTGCTGC TGATATCTCA GATGTTGCTT ATCTGAAGCA GAGTACAACA TCTGCAGCGG CCGGCACAGC CGAGAGTGTG TCTACTTGGA ACCAGGTTTC ACAAGTGGGG AATGGATATC CAGAACACAT GGTCTTTGAC GCTCAGTATC CTGGATGGTA CTATGATACA ATTGCTCAAG AGTGGCGCTC TCTGGACAGC TACAACCAGG CTTCTCAAAC AACTGTAACT GGTCAAGCTC ATGATCAGCA AGTTCAGAAT GGTCATGCTC ATACAGCTAC GTATCACAGT AATAGCCAGA GTAGTATGTA TGATGTTAAC GACAAAAACC AGAGTTTCAA AGCGCAAGAA TATGCTATGC AGAGCCAACA CGGAAGTTGG GACCAATCTT ACTATGCCAA CAATCAGCAG GCTGCAAACA CTTGGCAATC AGTAAATGTA GGTCAGGCTG AGCCTGCTAT AAATTCTAAT TCATTATCAA GCTTCAGAGG AAACCAGCAT GTAAATAATT TGTACAGTAC AGAACCTGTG GCTGAACAGT TTAAGCCAAA TGCGATTGGA GCGCAGAGCT TCATCCCGCA GCATATGAAT GTGGCTAGTG TCACACAGAA TGGACCATTG AGTTTCTCAA ACGGTGTCTA TAATAGACAG CAATCTGTAG ATGATGCTCA TCAGTCTTTT CAGAACAATC AGCTTTTCTC CCCAAGTGCG GGAAGATCAT CTGATGGTCG TCCACCACAT GCGCTTGTCA GTTTTGGATT TGGTGGGAAG CTCATTCTTA TGAAGGATAT AAATGGTTCT CTGCAGAATT CATCATTTGG AAGTCAGGGA ATTGGGGGAA GCTCCGCCTC TGTCTTAAAC TTGGCAGAAG TTATTTCTGG GAGTGCCTCT TATTCCAGTC AAGGGGAAGA CTCTTTGAGC TACTTTCGTT GCCTGCATCA ACAATCTCTT CCAGGTCCTT TGGTAGGAGG AAATGTTGGA AGTAAAGAGT TGCACAAGTG GATTGATGAG AGAATTTTGA ATTGTGAATC TTCCTATATG GATTTTTCAA GAGGGAAACT CTTAAAGATG CTTCTTTGTT TACTCCGAAT ATCTTGTCAG TATTATGGGA AACTCCGTTC TCCTTTTGGT ACTGATGCAT CGCAAAAGGA AACGGACTCT GCTGAAGCAG CAGTCGCTAA GCTTTTTGCA TTTGCAAAGA AAGATGGCTT ACAAAATGGT TATGCTCCTA TTAGCCAATG CTTGCAGCAT TTACCACCTG AATCACAAAT GCAAGTAACT GCTTCAGAGG TTCAGAATCT TCTGGCTTCT GGTAGAAAAA TGGAGGCTCT ACAATGTGCA CAAGAAGGCC ATTTATGGGG AATAGCGCTT GTTATCGCGG CACAACTTGG GGATCAGTTC TATGTAGACA CTGTGAAACA AATGGCCCTT CGCCAGCTGA TACCAGGGTC ACCTTTACGG ACATTGTGCC TACTGGTTGC AGGACAACCA GCTGAAGTGT GTCCCGCTGG AAGTAGTAGC ATGCTTGACA ATTGGGAAGA GAATTTGGGT ATAATAACTG CTAACAGAAC CACAGATGAT GAGCTTGTGA TTACTCATCT TGGAGATCGC ATGTGGAAAG ATAGGGGCGA GATAATTGCG GCGCATATTT GCTATTTAAT CGCGGACAAG AACTTTGATC CATACTCAGA AAGCGCCAGA CTCTGCCTTG TCGGAGCAGA CCATTGGAAA TGTCCTCGAA CATACGCAAG TCCAGAGGCT ATACAGAGGA CAGAGTTATA TGAATACTCT AAGACGCTGG GAAATTCTCA GTATATCCTG TTACCGTTTC AACCATATAA AATCATATAT GCCCATATGC TGGCTGAAGT TGGTAAACTT TCGACTGCGC TGAAGTACTG TCAAGCAGTA TTAAAATGCC TCAAGACAGG CCGATCACCA GAAGTGGAAA TGTGGAAACA GTTTGTTTCA TCTCTTGAAG AGAGAATCCG TATCCACCAA CAGGGCGGGT ATACTGCGAA TATGGCCCCA GCAAAACTTG TTGGAAAGTT CCTGAACTTT ATTGATACTA CAGCATCTCG TGTTGTTGGG GGGATGCCAC CACCTGCACC ACATTCAACA ACCGGAAACC TGCCGGTAAA TGACTATCAA CATCAACAGC AGGAAGCAGC TAAGTTATCA TATAGTCAAT CGGCTAATAC AATGTCATCA TTGATGCCAC CTGCTTCTTC AATTGAACCC GTGCGTGAGT TGGGTGGGAA CGGGAGGACA ATGGCAGCAC ATTCTAGAAG TGTATCAGAA CCAGATTTCG GTAGGACGCC AATACAGGAT CAGACTGACT CCTCAAAAGA CAAAGCTGCT GATGGGGTGA CACAGGTGAA AGCAACTCGT AGTGTGCCAA GTTCTCGGTT TAGCCGCTTT GGTATTGGAA TACTGAAGAG GGTCTTACCA TCTCGTTCAT CTAAAGAGGC AAAACTGGGT GACGAGAATC AATTCTACTA TGACGATAAT CTAAAGAGAT GGGTGGAAAG AGGTGTGGAA CCCCCAGCTG AGGAAGCTGC ACTACCTCCT CCTCCAACGT TAGGCGCATT CCGAAGCAAC TCATTGGGTT ATGAAAACAA ATCTGACATG AAGAACGAGA TGTCTCCATC TAGTGGGAGC TGGAGTAGTG GCAGCCCAAC TCCGTCAGAG AATTCTTCGG GAATCCCACC AGTATCACAG GGCTCAAACC AATTCTCAGC TCGTGGACGT ATGGGTGTGC GTGCAAGATA CGTTGACACC TTTAATCAAG GCCGTGGAAA CTCCTCGAGC ATGTATCAGT CACCTCCCGT ACAATCTGCT AAACCACCGA TTCCTGCAAA AGCAAAATTC TTCGTCCCAG CAGCACCGGC ATCGTTTGCA AACGACCAGG TAATGGAATC GGTTAGTGAT GAAACCAGAC AGGAGAACTC AGCAGATGAA GAGGTAGTAG GGTCTGCAGG CGCTCCAGGA CCAAGCCAGT CTTCATTCCA GTCCCCGACA CCATCTCCAA TGGCAATGCA GAGATTTCCA AGTCTAGACA ACATCAAAAG AAGTGGATCA GGAATAAGCC TTAATGGTGA TCTTCCTCCG TCAGGATCAA GAAGAACAGC TTCATGGAGC GGAAGCGTCA ACAGCTCGTC GTTTATGTCT CCAACGAGTG CATCAACATT CAAACCAAGC CCACTGAACA GTAGCAGTAG CAGCTTAGGA GAGGAGCTTC AGGAAGTGGA ACTGTAAGTT GAAAAATCTG TAATATCACA ACAACAACAA CAAAAAGTTT TGCTCACTGT CACAACAACA ACAGGTTAGA TCGATCAATC AATCAAATGT GAATCCATGA GTTACCCAAA ATTACATAAA ACACTTACTC TGCTTCTGTC AACGACGGGG GCAAATATGT ATTATGCCGT TTGTAATTTT TTTTTCTTTT TTTTTTCTAA ATATAAATTC ATTAATTTTT CTTTGTTAAC AGACTTGAGG AATTACACAA TAATGCACAT TAATATTTCG TTTATGAGTG ATAATCAAAT TTGTTCACC |
| Length | 4379 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 152719.. 158759 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G47480.1 |
| Description | RGPR-related |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.63325 |
Ahg491411 | nuclear poly(a) polymerase |
| 7.93725 |
Ahg488117 | RNA helicase family protein |
| 9.79796 |
Ahg495205 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 11.4891 |
Ahg918742 | transcription regulators |
| 12.49 |
Ahg946015 | proline-rich spliceosome-associated (PSP) family protein |
| 12.49 |
Ahg472958 | |
| 12.9615 |
Ahg892895 | Splicing factor, CC1-like |
| 14.4914 |
Ahg929898 | RING/U-box superfamily protein |
| 14.9666 |
Ahg477669 | small and basic intrinsic protein 1A |
| 15.906 |
Ahg488204 | pheophytinase |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|